RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 FAM20BO75063 409 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 PTP4A3O75365 173 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 FSTL3O95633 263 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 TSPAN15O95858 294 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 VIMP08670 466 aaKnown RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 SRP9P49458 86 aaKnown RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 RAD23AP54725 363 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 LSM6P62312 80 aaKnown RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 SF3A3Q12874 501 aaKnown RBP eCLIP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 KRR1Q13601 381 aaKnown RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 TRAM2Q15035 370 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 KRTAP27-1Q3LI81 207 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 ZBED5Q49AG3 693 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 ERICH5Q6P6B1 374 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 TMPRSS11FQ6ZWK6 438 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 MBOAT2Q6ZWT7 520 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 NAA40Q86UY6 237 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 GLB1L2Q8IW92 636 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 DYDC1Q8WWB3 177 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 ACOT11Q8WXI4 607 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 PLEKHA8Q96JA3 519 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 ZNF582Q96NG8 517 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 NUAK2Q9H093 628 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 NMNAT1Q9HAN9 279 aaPredicted RBP13.88□□□□□ -0.19
TARDBP-225ENST00000621715 CLN8Q9UBY8 286 aa13.88□□□□□ -0.19
TARDBP-225ENST00000621715 HTR3EA5X5Y0 456 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 IFNL4K9M1U5 179 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 SOCS2O14508 198 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 TNFRSF13BO14836 293 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-225ENST00000621715 IFNA14P01570 189 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 CPT2P23786 658 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 CDKN2AP42771 156 aaKnown RBP13.87□□□□□ -0.19
TARDBP-225ENST00000621715 GATA4P43694 442 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 KLF10Q13118 480 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 KCNMB1Q16558 191 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 GPR157Q5UAW9 335 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 ZNF730Q6ZMV8 503 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 CFAP77Q6ZQR2 320 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 DCDC5Q6ZRR9 648 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 COLCA1Q6ZS62 124 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 APOBEC3DQ96AK3 386 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-225ENST00000621715 FAM46AQ96IP4 442 aaKnown RBP13.87□□□□□ -0.19
TARDBP-225ENST00000621715 MAGEB18Q96M61 343 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 COG8Q96MW5 612 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 FNDC11Q9BVV2 318 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 MMP27Q9H306 513 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 UFSP2Q9NUQ7 469 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 INTS9Q9NV88 658 aaKnown RBP13.87□□□□□ -0.19
TARDBP-225ENST00000621715 CMTM6Q9NX76 183 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 VSX1Q9NZR4 365 aaPredicted RBP13.87□□□□□ -0.19
TARDBP-225ENST00000621715 SIGLEC7Q9Y286 467 aa13.87□□□□□ -0.19
TARDBP-225ENST00000621715 A0A1B0GUS0 222 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 C5orf63A6NC05 138 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 XKRYO14609 159 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 PHYHO14832 338 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
TARDBP-225ENST00000621715 IGHV4-59P01825 116 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 FPR3P25089 353 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 PROK1P58294 105 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 GK2Q14410 553 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-225ENST00000621715 ANKDD1AQ495B1 522 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 ZNF362Q5T0B9 420 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-225ENST00000621715 SFRP4Q6FHJ7 346 aaPredicted RBP13.86□□□□□ -0.19
TARDBP-225ENST00000621715 NLRC3Q7RTR2 1065 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 FGFRL1Q8N441 504 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 OR2T12Q8NG77 320 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 LINC01006Q8NI28 216 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 Q8TCH9 128 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 SH3GL1Q99961 368 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 TMEM120AQ9BXJ8 343 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 RASSF4Q9H2L5 321 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 NOX4Q9NPH5 578 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 NRIP3Q9NQ35 241 aa13.86□□□□□ -0.19
TARDBP-225ENST00000621715 LOC100653049A0A140TA62 436 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 J3QW42 95 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 ENSAO43768 121 aaKnown RBP13.85□□□□□ -0.19
TARDBP-225ENST00000621715 AHCYL1O43865 530 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 KRT34O76011 436 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 IFNW1P05000 195 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 CRYBA1P05813 215 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 ACSM4P0C7M7 580 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 SDHAP31040 664 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 RGS6P49758 472 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 ELF3P78545 371 aaPredicted RBP13.85□□□□□ -0.19
TARDBP-225ENST00000621715 COQ5Q5HYK3 327 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 METTL21CQ5VZV1 264 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 LINC00346Q8IVM7 164 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 RNF113BQ8IZP6 322 aaKnown RBP13.85□□□□□ -0.19
TARDBP-225ENST00000621715 SLC7A13Q8TCU3 470 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 COQ7Q99807 217 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 SIRPDQ9H106 197 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 PNRC2Q9NPJ4 139 aaKnown RBP13.85□□□□□ -0.19
TARDBP-225ENST00000621715 SAR1AQ9NR31 198 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 TMEM100Q9NV29 134 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 ATPIF1Q9UII2 106 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 RPS6KA6Q9UK32 745 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 RNF114Q9Y508 228 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 IER3IP1Q9Y5U9 82 aa13.85□□□□□ -0.19
TARDBP-225ENST00000621715 IGLV1-36A0A0B4J1U3 117 aa13.84□□□□□ -0.19
TARDBP-225ENST00000621715 A0A0U1RQK1 487 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms