RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 ADOQ96SZ5 270 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 MAP3K3Q99759 626 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 IFT22Q9H7X7 185 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 MBD2Q9UBB5 411 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 LHX6Q9UPM6 363 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 EMC9Q9Y3B6 208 aa11.66□□□□□ -0.54
SKP2-209ENST00000620197 A0A0A6YYD4 124 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 A0A0B4J2A0 478 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 A8MVM7 634 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 H0YIZ8 118 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 ETV2O00321 342 aaPredicted RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 LINC01565O15544 149 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 PLGP00747 810 aaPredicted RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 VSIG8P0DPA2 414 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 PNLIPRP2P54317 469 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 MRPS21P82921 87 aaKnown RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 C1orf140Q5VVS0 124 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 NSUN5P2Q63ZY6 315 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 MARCH3Q86UD3 253 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 GVQW1Q8N7I0 195 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 ZNF563Q8TA94 476 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 PHB2Q99623 299 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 ADAT1Q9BUB4 502 aaKnown RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 ZMAT3Q9HA38 289 aaKnown RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 SHPKQ9UHJ6 478 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 FOXI3A8MTJ6 420 aaPredicted RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 HLA-DOBP13765 273 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 CXCR1P25024 350 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 CRABP1P29762 137 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 CX3CR1P49238 355 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 CCR4P51679 360 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 GLO1Q04760 184 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 ZNF704Q6ZNC4 412 aaPredicted RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 TRAPPC6BQ86SZ2 158 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 ALPK2Q86TB3 2170 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 ZSCAN4Q8NAM6 433 aaPredicted RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 OR10S1Q8NGN2 331 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 MMABQ96EY8 250 aaPredicted RBP11.65□□□□□ -0.54
SKP2-209ENST00000620197 LRRC61Q9BV99 259 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 PISDQ9UG56 409 aa11.65□□□□□ -0.54
SKP2-209ENST00000620197 TMED7-TICAM2A0A0A6YYA0 188 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 IGKV1D-43A0A0B4J1Z2 117 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 PQLC2LA1A4F0 135 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 OR6C76A6NM76 312 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 C11orf98E9PRG8 122 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 STK17BO94768 372 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 TTRP02766 147 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 AVPR2P30518 371 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 SPOCK1Q08629 439 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 TAF13Q15543 124 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 VAX1Q5SQQ9 334 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 CBLN2Q8IUK8 224 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 CCDC36Q8IYA8 594 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 SVBPQ8N300 66 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 WNT2BQ93097 391 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 SEC22AQ96IW7 307 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 C12orf57Q99622 126 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 COA3Q9Y2R0 106 aaPredicted RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 NOP16Q9Y3C1 178 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 EIF1AYO14602 144 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 PAX6P26367 422 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 PSMB6P28072 239 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 EIF1AXP47813 144 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 OR52W1Q6IF63 320 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 CRIP3Q6Q6R5 217 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 C5orf46Q6UWT4 87 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 BOLLQ8N9W6 283 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 NUBPLQ8TB37 319 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 CMKLR1Q99788 373 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 ATPIF1Q9UII2 106 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 DCDC2BA2VCK2 349 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 LILRA5A6NI73 299 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 HPGDP15428 266 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 RPS2P15880 293 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 HRH1P35367 487 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 STARP49675 285 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 RAB13P51153 203 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 SUPT4H1P63272 117 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 CXADRP78310 365 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 LHFPL1Q86WI0 220 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 ACBD4Q8NC06 268 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 RHBDD1Q8TEB9 315 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 CMBLQ96DG6 245 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 SMIM8Q96KF7 97 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 AQP10Q96PS8 301 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 ZNF471Q9BX82 626 aaPredicted RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 RAB33BQ9H082 229 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 FARSAQ9Y285 508 aaKnown RBP11.64□□□□□ -0.55
SKP2-209ENST00000620197 SLCO1B1Q9Y6L6 691 aa11.64□□□□□ -0.55
SKP2-209ENST00000620197 ERCC1P07992 297 aaPredicted RBP11.63□□□□□ -0.55
SKP2-209ENST00000620197 PGCP20142 388 aa11.63□□□□□ -0.55
SKP2-209ENST00000620197 IL11P20809 199 aa11.63□□□□□ -0.55
SKP2-209ENST00000620197 RPL35P42766 123 aaKnown RBP11.63□□□□□ -0.55
SKP2-209ENST00000620197 RNASE10Q5GAN6 216 aaKnown RBP11.63□□□□□ -0.55
SKP2-209ENST00000620197 BEX5Q5H9J7 111 aa11.63□□□□□ -0.55
SKP2-209ENST00000620197 TMEM244Q5VVB8 128 aa11.63□□□□□ -0.55
SKP2-209ENST00000620197 PTCRAQ6ISU1 281 aaPredicted RBP11.63□□□□□ -0.55
SKP2-209ENST00000620197 OR52N4Q8NGI2 321 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms