RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PPP1R35Q8TAP8 253 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 ACOT11Q8WXI4 607 aaPredicted RBP3.72□□□□□ -1.81
SNCA-213ENST00000618500 MAP6Q96JE9 813 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 TECTBQ96PL2 329 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 PANX1Q96RD7 426 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 ABCB9Q9NP78 766 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 POLE4Q9NR33 117 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 INIPQ9NRY2 104 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 ZIM2Q9NZV7 527 aa3.72□□□□□ -1.81
SNCA-213ENST00000618500 TMEM233B4DJY2 109 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 FCN3O75636 299 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 TIPRLO75663 272 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 CPSF4O95639 269 aaKnown RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 ABHD16AO95870 558 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 CHRNGP07510 517 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 ADORA3P0DMS8 318 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 ETFAP13804 333 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 LBPP18428 481 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 EEF1B2P24534 225 aaKnown RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 CDKN2CP42773 168 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 GSK3AP49840 483 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 CDH12P55289 794 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 CAV3P56539 151 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 NCALDP61601 193 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 DBPQ10586 325 aaPredicted RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 TCTEX1D4Q5JR98 221 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 HCP5Q6MZN7 132 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 TTC33Q6PID6 262 aaPredicted RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 MOGAT3Q86VF5 341 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 JAZF1Q86VZ6 243 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 LRRC75AQ8NAA5 344 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 OR51D1Q8NGF3 324 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 OR10Z1Q8NGY1 313 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 OR5K1Q8NHB7 308 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 ITCHQ96J02 903 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 MAELQ96JY0 434 aaKnown RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 ZNF582Q96NG8 517 aaPredicted RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 PRSS22Q9GZN4 317 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 PPA2Q9H2U2 334 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 METTL8Q9H825 291 aaKnown RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 RMND5AQ9H871 391 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 AKTIPQ9H8T0 292 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 RNPEPL1Q9HAU8 725 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 TMEM100Q9NV29 134 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 MRPL15Q9P015 296 aaKnown RBP3.71□□□□□ -1.81
SNCA-213ENST00000618500 LGALS13Q9UHV8 139 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 HIF3AQ9Y2N7 669 aa3.71□□□□□ -1.81
SNCA-213ENST00000618500 BIRC5O15392 142 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 RNF13O43567 381 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 IFNW1P05000 195 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 LYL1P12980 280 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 PCBP3P57721 371 aaKnown RBP3.71□□□□□ -1.82
SNCA-213ENST00000618500 MELKQ14680 651 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 RGNQ15493 299 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 WHAMMP3Q1A5X7 153 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 SPATA46Q5T0L3 261 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 BTN2A1Q7KYR7 527 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 FAM71E2Q8N5Q1 922 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 PIFOQ8TCI5 191 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 STON2Q8WXE9 905 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.71□□□□□ -1.82
SNCA-213ENST00000618500 HDAC2Q92769 488 aaKnown RBP3.71□□□□□ -1.82
SNCA-213ENST00000618500 ZBTB18Q99592 522 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 HDHD2Q9H0R4 259 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 LIN7BQ9HAP6 207 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 SSU72Q9NP77 194 aaKnown RBP3.71□□□□□ -1.82
SNCA-213ENST00000618500 PITPNC1Q9UKF7 332 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 TCF19Q9Y242 345 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 CAPN7Q9Y6W3 813 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 DOCK11Q5JSL3 2073 aa3.71□□□□□ -1.82
SNCA-213ENST00000618500 TRAPPC13A5PLN9 417 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 HIST1H2ABP04908 130 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SAA4P35542 130 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 MYCNOSP40205 109 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ERVFRD-1P60508 538 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 REEP3Q6NUK4 255 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 HIST3H2AQ7L7L0 130 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 NANOGNBQ7Z5D8 188 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 C11orf42Q8N5U0 333 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 SDR9C7Q8NEX9 313 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 OR5D13Q8NGL4 314 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 AKR7LQ8NHP1 331 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 ADAMTS16Q8TE57 1224 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 NSMAFQ92636 917 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 HIST1H2ACQ93077 130 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 CITED2Q99967 270 aaPredicted RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 PAIP1Q9H074 479 aaKnown RBP3.7□□□□□ -1.82
SNCA-213ENST00000618500 TPT1P8Q9HAU6 139 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 NANSQ9NR45 359 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 GIMAP2Q9UG22 337 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 KCNG2Q9UJ96 466 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 TMCC3Q9ULS5 477 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 RAP2CQ9Y3L5 183 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 A0A1W2PPM1 405 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 RFXANKO14593 260 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 DVL1O14640 695 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 CHST1O43916 411 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 DOK2O60496 412 aa3.7□□□□□ -1.82
SNCA-213ENST00000618500 GRK5P34947 590 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms