RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 SGPP2Q8IWX5 399 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 OTOSQ8NHW6 89 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 TSPAN32Q96QS1 320 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 ATF6BQ99941 703 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 DNAJB11Q9UBS4 358 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 UGT2A1Q9Y4X1 527 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 R4GMQ9 66 aa12.49□□□□□ -0.41
CIITA-213ENST00000618327 B4DXG7 233 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 CYC1P08574 325 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 SNRNP70P08621 437 aaKnown RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 FGF5P12034 268 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 RAB6AP20340 208 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 EFNA3P52797 238 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 RTL6Q6ICC9 239 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 OR4M1Q8NGD0 313 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 OR56B4Q8NH76 319 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 METTL17Q9H7H0 456 aaPredicted RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 TMEM100Q9NV29 134 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 GDF2Q9UK05 429 aaPredicted RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 GVINP1Q7Z2Y8 2422 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 PTPRDP23468 1912 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 COL4A6Q14031 1691 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 LOC100289279A0A1B0GTE1 492 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 ZNF705GA8MUZ8 300 aaPredicted RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 LIMS3P0CW19 117 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 LIMS4P0CW20 117 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 CDKN2AP42771 156 aaKnown RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 RAC1P63000 192 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 C1QL3Q5VWW1 255 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 C17orf47Q8NEP4 570 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 OR9K2Q8NGE7 335 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 LIPHQ8WWY8 451 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 PIGTQ969N2 578 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 PRRT1Q99946 306 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 TANC1Q9C0D5 1861 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 NLRC5Q86WI3 1866 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 TRGV5A0A0B4J1U4 118 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 ANKRD61A6NGH8 418 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 SLC22A20A6NK97 555 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 OR7C1O76099 320 aaPredicted RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 HOXB9P17482 250 aaPredicted RBP12.48□□□□□ -0.41
CIITA-213ENST00000618327 GDNFP39905 211 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 DEFA6Q01524 100 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 CTF1Q16619 201 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 TMEM81Q6P7N7 255 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 ALKAL2Q6UX46 152 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 MDGA2Q7Z553 956 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 LILRB2Q8N423 598 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 PPP1R35Q8TAP8 253 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 C11orf40Q8WZ69 217 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 TAS2R4Q9NYW5 299 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 BOLA1Q9Y3E2 137 aa12.48□□□□□ -0.41
CIITA-213ENST00000618327 FITM1A5D6W6 292 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 PLPP3O14495 311 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 TNFSF4P23510 183 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 TBC1D28Q2M2D7 210 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 SYT9Q86SS6 491 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 SEMA6DQ8NFY4 1073 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 RAB3CQ96E17 227 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
CIITA-213ENST00000618327 PSD2Q9BQI7 771 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 ICAM5Q9UMF0 924 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 COPS3Q9UNS2 423 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 A0A096LPE4 126 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 A0A1W2PPZ6 126 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 GMDSO60547 372 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 CDAP32320 146 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 ACAA2P42765 397 aaKnown RBP12.47□□□□□ -0.41
CIITA-213ENST00000618327 MEOX1P50221 254 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 FMODQ06828 376 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 CLN3Q13286 438 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 PEA15Q15121 130 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 APOOLQ6UXV4 268 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.47□□□□□ -0.41
CIITA-213ENST00000618327 ADGRE4PQ86SQ3 457 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 CD163Q86VB7 1156 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 DNAAF1Q8NEP3 725 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 CHRNA10Q9GZZ6 450 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 RBFOX1Q9NWB1 397 aaKnown RBP12.47□□□□□ -0.41
CIITA-213ENST00000618327 RPS10-NUDT3A0A1W2PQS6 291 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 PRRG2O14669 202 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 IL2RAP01589 272 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 IFI6P09912 130 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 B4GALT1P15291 398 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 RPS10P46783 165 aaKnown RBP12.47□□□□□ -0.41
CIITA-213ENST00000618327 FXYD4P59646 89 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 SPINK14Q6IE38 97 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 ANGPTL5Q86XS5 388 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 SELENOIQ9C0D9 397 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 HRH4Q9H3N8 390 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 NGBQ9NPG2 151 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 PCDHGA1Q9Y5H4 931 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 PDGFAP04085 211 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 STPG1Q5TH74 334 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 VHLLQ6RSH7 139 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 CCDC71LQ8N9Z2 235 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 FNDC9Q8TBE3 224 aa12.47□□□□□ -0.41
CIITA-213ENST00000618327 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms