RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 GATA3P23771 443 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 SLC6A6P31641 620 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 LIPAP38571 399 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 CDKN2AP42771 156 aaKnown RBP16.05■□□□□ 0.16
CDX1-202ENST00000616154 ARHGDIAP52565 204 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 SCRN3Q0VDG4 424 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 TSPAN31Q12999 210 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 DCAF12L2Q5VW00 463 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 ZNF620Q6ZNG0 422 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 GLB1L2Q8IW92 636 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 OR9Q2Q8NGE9 314 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 NRG4Q8WWG1 115 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 CCL17Q92583 94 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 FEVQ99581 238 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 CIB1Q99828 191 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 C9orf16Q9BUW7 83 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 SUCNR1Q9BXA5 334 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 OR2J1Q9GZK6 312 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 EGLN1Q9GZT9 426 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 ATPIF1Q9UII2 106 aa16.05■□□□□ 0.16
CDX1-202ENST00000616154 NDRG4Q9ULP0 352 aaKnown RBP16.05■□□□□ 0.16
CDX1-202ENST00000616154 SOCS2O14508 198 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 IDH3BO43837 385 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 SLC16A7O60669 478 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 ANXA8P13928 327 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 PEX2P28328 305 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 SLC3A1Q07837 685 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 AQP6Q13520 282 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 KDM4DQ6B0I6 523 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 ZNF774Q6NX45 483 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 ABHD4Q8TB40 342 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 GNPDA2Q8TDQ7 276 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 DNAJC9Q8WXX5 260 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 ZMYND19Q96E35 227 aaPredicted RBP16.04■□□□□ 0.16
CDX1-202ENST00000616154 GAL3ST1Q99999 423 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 NUAK2Q9H093 628 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 EMC7Q9NPA0 242 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 C8orf4Q9NR00 106 aa16.04■□□□□ 0.16
CDX1-202ENST00000616154 IGLV1-36A0A0B4J1U3 117 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 PPP1R3DO95685 299 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 GASTP01350 101 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 ALPLP05186 524 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 CD55P08174 381 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 ADRA2CP18825 462 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 PRKACGP22612 351 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 TUBG1P23258 451 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 CRABP1P29762 137 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 DAPP51397 102 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 PPP1CBP62140 327 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 ZMAT1Q5H9K5 638 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 PACRGLQ8N7B6 248 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 AQP11Q8NBQ7 271 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 NANPQ8TBE9 248 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 GCDHQ92947 438 aaPredicted RBP16.03■□□□□ 0.16
CDX1-202ENST00000616154 EME1Q96AY2 570 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 DIRC2Q96SL1 478 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 SLC29A1Q99808 456 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 SLC6A7Q99884 636 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 TUBG2Q9NRH3 451 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 KLHL21Q9UJP4 597 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 ZDHHC8Q9ULC8 765 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 COA3Q9Y2R0 106 aaPredicted RBP16.03■□□□□ 0.16
CDX1-202ENST00000616154 MGAM2Q2M2H8 2515 aa16.03■□□□□ 0.16
CDX1-202ENST00000616154 OR6C6A6NF89 314 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 DCTN6O00399 190 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 FSHBP01225 129 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 HIST1H3AP68431 136 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 COX10Q12887 443 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 HIST2H3PS2Q5TEC6 136 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 LPCAT4Q643R3 524 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 RPL13AP3Q6NVV1 102 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 DNM1P34Q6PK57 102 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 ZBTB49Q6ZSB9 765 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 HIST2H3AQ71DI3 136 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 VASH1Q7L8A9 365 aaPredicted RBP16.02■□□□□ 0.16
CDX1-202ENST00000616154 ZBTB46Q86UZ6 589 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 CBR4Q8N4T8 237 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 C3orf56Q8N813 242 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 C4orf45Q96LM5 186 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 ERMAPQ96PL5 475 aaPredicted RBP16.02■□□□□ 0.16
CDX1-202ENST00000616154 RBM4BQ9BQ04 359 aaKnown RBP16.02■□□□□ 0.16
CDX1-202ENST00000616154 C7orf69Q9H7B7 122 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 ELOVL3Q9HB03 270 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 TBCCD1Q9NVR7 557 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 IL20Q9NYY1 176 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 OPN4Q9UHM6 478 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 CDH10Q9Y6N8 788 aa16.02■□□□□ 0.16
CDX1-202ENST00000616154 ISPDA4D126 451 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 J3QW42 95 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 EI24O14681 340 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 SGCEO43556 437 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 NGFP01138 241 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 HIST1H1CP16403 213 aaKnown RBP16.01■□□□□ 0.15
CDX1-202ENST00000616154 ALDH3A2P51648 485 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 OR6V1Q8N148 313 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 PARP8Q8N3A8 854 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 BPIFB2Q8N4F0 458 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 SAMD8Q96LT4 415 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 NIPSNAP1Q9BPW8 284 aa16.01■□□□□ 0.15
CDX1-202ENST00000616154 PPIAL4EA0A075B759 164 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms