RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 CORO6Q6QEF8 472 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 SHISA2Q6UWI4 295 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 HACD2Q6Y1H2 254 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 MOGAT3Q86VF5 341 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 KLBQ86Z14 1044 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 PARP8Q8N3A8 854 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR52E2Q8NGJ4 325 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 CCDC134Q9H6E4 229 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 EFCAB1Q9HAE3 211 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 ABCD2Q9UBJ2 740 aa17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 SOX21Q9Y651 276 aaPredicted RBP17.39■□□□□ 0.37
TRAPPC3-208ENST00000616074 IGLV1-36A0A0B4J1U3 117 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 IQCF6A8MYZ5 107 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 PPP1R3DO95685 299 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 RNASE1P07998 156 aaKnown RBP17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 SELEP16581 610 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 CRABP1P29762 137 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 PRSS12P56730 875 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 GNB2P62879 340 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 RSPO1Q2MKA7 263 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 FAM201AQ5SY85 155 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 PGM2L1Q6PCE3 622 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 DNM1P34Q6PK57 102 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 SMARCD3Q6STE5 483 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 BTNL3Q6UXE8 466 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 JAZF1Q86VZ6 243 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 FAM86B1Q8N7N1 296 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR52J3Q8NH60 311 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 DACT3Q96B18 629 aaPredicted RBP17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 C7orf34Q96L11 122 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 TMEM246Q9BRR3 403 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 MIOXQ9UGB7 285 aa17.38■□□□□ 0.37
TRAPPC3-208ENST00000616074 IGHV2-70DA0A0C4DH43 119 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 NDUFAB1O14561 156 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 CCDC22O60826 627 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 PPIAL4GP0DN37 164 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 CPT2P23786 658 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 PMELP40967 661 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 COX10Q12887 443 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 SLC9A3R2Q15599 337 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 ZNF181Q2M3W8 571 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 ZNF404Q494X3 552 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 LRRN1Q6UXK5 716 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 C9orf139Q6ZV77 190 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR6V1Q8N148 313 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 FANK1Q8TC84 345 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 TAF15Q92804 592 aaKnown RBP eCLIP17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 UPRTQ96BW1 309 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 NEIL1Q96FI4 390 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 DHRS1Q96LJ7 313 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 ERMAPQ96PL5 475 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 FUZQ9BT04 418 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 ZNF696Q9H7X3 374 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 KRCC1Q9NPI7 259 aaPredicted RBP17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 B9D1Q9UPM9 204 aa17.37■□□□□ 0.37
TRAPPC3-208ENST00000616074 CMYA5Q8N3K9 4069 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 TRAV40A0A0B4J280 105 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 CLDN34H7C241 214 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 KCNAB3O43448 404 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 PLATP00750 562 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 HLA-DPB1P04440 258 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 PSME3P61289 254 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 KRTAP27-1Q3LI81 207 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 GLYATQ6IB77 296 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 LEG1Q6P5S2 330 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 CFAP77Q6ZQR2 320 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 COLCA1Q6ZS62 124 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 LINC00346Q8IVM7 164 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 SLC26A10Q8NG04 563 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 RAB40AQ8WXH6 277 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 SLC25A28Q96A46 364 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 NMNAT3Q96T66 252 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 UNKLQ9H9P5 680 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 SRA1Q9HD15 236 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 DCAF13Q9NV06 445 aaKnown RBP17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 TMEM100Q9NV29 134 aa17.36■□□□□ 0.37
TRAPPC3-208ENST00000616074 A0A1B0GWJ7 208 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 LRRC30A6NM36 301 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 ACSM4P0C7M7 580 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 FPR3P25089 353 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 MTNR1AP48039 350 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 SLC18B1Q6NT16 456 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 C1orf87Q8N0U7 546 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR8B3Q8NGG8 313 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 PLEKHA8Q96JA3 519 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR8B2Q96RD0 313 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 HCAR1Q9BXC0 346 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR52D1Q9H346 318 aa17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 SAMD4AQ9UPU9 718 aaKnown RBP17.35■□□□□ 0.37
TRAPPC3-208ENST00000616074 MDFIC2A0A1B0GVS7 189 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 FSTL3O95633 263 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 HIST1H1CP16403 213 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 MDH1P40925 334 aaKnown RBP17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 GATA4P43694 442 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 PITPNBP48739 271 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 MAB21L1Q13394 359 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 GK2Q14410 553 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 KRT72Q14CN4 511 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 RFX4Q33E94 735 aa17.34■□□□□ 0.37
TRAPPC3-208ENST00000616074 OR4K13Q8NH42 304 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms