RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 P2RY10O00398 339 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 IGHV2-70P01814 119 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 PRF1P14222 555 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 ABOP16442 354 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 CST6Q15828 149 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 TMEM52BQ4KMG9 183 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 LILRA6Q6PI73 481 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 ZNF550Q7Z398 422 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 NRIP2Q9BQI9 281 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 RAB11FIP5Q9BXF6 653 aa11.83□□□□□ -0.51
MSH6-214ENST00000616033 FAM212BQ9NTI7 297 aaPredicted RBP11.83□□□□□ -0.51
MSH6-214ENST00000616033 LOC101059948A0A1B0GTJ6 334 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 NME2P1O60361 137 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 ALOX5APP20292 161 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 NDUFA6P56556 154 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 DHRS7BQ6IAN0 325 aaPredicted RBP11.83□□□□□ -0.52
MSH6-214ENST00000616033 OR4D6Q8NGJ1 314 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 TMEM41AQ96HV5 264 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 JSRP1Q96MG2 331 aaPredicted RBP11.83□□□□□ -0.52
MSH6-214ENST00000616033 OR2A5Q96R48 311 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 FN3KRPQ9HA64 309 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 KCNK7Q9Y2U2 307 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 A0A087WUJ7 227 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 BTBD17A6NE02 478 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 ZNF10P21506 573 aaPredicted RBP11.83□□□□□ -0.52
MSH6-214ENST00000616033 CD226Q15762 336 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 CHRDL2Q6WN34 429 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 TSPAN32Q96QS1 320 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 Q9N2J8 555 aa11.83□□□□□ -0.52
MSH6-214ENST00000616033 H0YIZ8 118 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 SNAPC5O75971 98 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 LPAR6P43657 344 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 PRPS1P60891 318 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 PJVKQ0ZLH3 352 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 GGTLC2Q14390 218 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 NAXEQ8NCW5 288 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 SP7Q8TDD2 431 aaPredicted RBP11.82□□□□□ -0.52
MSH6-214ENST00000616033 NPRL2Q8WTW4 380 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 TCTEX1D2Q8WW35 142 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 NECAB3Q96P71 396 aaPredicted RBP11.82□□□□□ -0.52
MSH6-214ENST00000616033 SPOCK3Q9BQ16 436 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 MRI1Q9BV20 369 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 BANF2Q9H503 90 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 REV3LO60673 3130 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 ZNF205O95201 554 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 RPS4Y1P22090 263 aaKnown RBP11.82□□□□□ -0.52
MSH6-214ENST00000616033 MECP2P51608 486 aaKnown RBP11.82□□□□□ -0.52
MSH6-214ENST00000616033 TMEM104Q8NE00 496 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 OR5D18Q8NGL1 313 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 ST6GALNAC5Q9BVH7 336 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 HRASLS2Q9NWW9 162 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 TRBV5-5A0A0J9YX44 114 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 HCRTR2O43614 444 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 CRHP06850 196 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
MSH6-214ENST00000616033 SLC2A1P11166 492 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 RAB32Q13637 225 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 TSC22D1Q15714 1073 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 SLC35D3Q5M8T2 416 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 FHL5Q5TD97 284 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 FGGYQ96C11 551 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 ZNF524Q96C55 264 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 ADOQ96SZ5 270 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 URGCP-MRPS24S4R325 110 aa11.82□□□□□ -0.52
MSH6-214ENST00000616033 PHF3Q92576 2039 aaKnown RBP11.82□□□□□ -0.52
MSH6-214ENST00000616033 SERINC4A6NH21 518 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 SLC33A1O00400 549 aaPredicted RBP11.81□□□□□ -0.52
MSH6-214ENST00000616033 ZNF44P15621 663 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 ZBTB25P24278 435 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 LAP3P28838 519 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 TACR3P29371 465 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 PPM1AP35813 382 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 TSFMP43897 325 aaKnown RBP11.81□□□□□ -0.52
MSH6-214ENST00000616033 CEBPEQ15744 281 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 AGBL4Q5VU57 503 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 ASPHD2Q6ICH7 369 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 UQCC3Q6UW78 93 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 TMEM229BQ8NBD8 167 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 OR10D4PQ8NGN7 298 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 MISP3Q96FF7 219 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 ZFYVE21Q9BQ24 234 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 SLC17A9Q9BYT1 436 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 RGCCQ9H4X1 137 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 LSM5Q9Y4Y9 91 aaKnown RBP11.81□□□□□ -0.52
MSH6-214ENST00000616033 OBSL1O75147 1896 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 ABHD16AO95870 558 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 CD8AP01732 235 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 OPN1LWP04000 364 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 S100A8P05109 93 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 OR8U9P0C7N5 309 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 OR13C7P0DN81 318 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 GDI1P31150 447 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 RASGEF1BQ0VAM2 473 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 VWA2Q5GFL6 755 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 NPSR1Q6W5P4 371 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 Q6ZRG5 221 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 MAMDC2Q7Z304 686 aaPredicted RBP11.81□□□□□ -0.52
MSH6-214ENST00000616033 RNF144BQ7Z419 303 aa11.81□□□□□ -0.52
MSH6-214ENST00000616033 CDC20BQ86Y33 519 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms