RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 PCOLCEQ15113 449 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF468Q5VIY5 522 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 IDO2Q6ZQW0 420 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 ELMOD2Q8IZ81 293 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 MRGPRX4Q96LA9 322 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF275Q9NSD4 429 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR2M5A3KFT3 312 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 PMS2P1A4D2B8 440 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 POM121CA8CG34 1229 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 SCO1O75880 301 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 RAB3DO95716 219 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 QDPRP09417 244 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 RPS18P62269 152 aaKnown RBP12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 PHYHD1Q5SRE7 291 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR6M1Q8NGM8 313 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 NPRL2Q8WTW4 380 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 TTC9Q92623 222 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 UCN2Q96RP3 112 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 ARID1AO14497 2285 aa12.49□□□□□ -0.41
PCDHGA3-202ENST00000612467 LDLRAD4O15165 306 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 DKK1O94907 266 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 CRYZL1O95825 349 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 F10P00742 488 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 GNB3P16520 340 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 LIN54Q6MZP7 749 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 C3orf33Q6P1S2 294 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 C5orf46Q6UWT4 87 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF813Q6ZN06 617 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 LYPD6Q86Y78 171 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 NOXO1Q8NFA2 376 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 SUN5Q8TC36 379 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 RNF138Q8WVD3 245 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 SLC6A7Q99884 636 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 C1orf198Q9H425 327 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 FXYD6-FXYD2A0A087WZ82 144 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 RPS10-NUDT3A0A1W2PQS6 291 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 M0R233 179 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 AQP8O94778 261 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 FSTP19883 344 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 AP2S1P53680 142 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 SUMO3P55854 103 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 P2RX3P56373 397 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 CLDN17P56750 224 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 OPCMLQ14982 345 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 MFSD13AQ14CX5 517 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 KLHL24Q6TFL4 600 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 ABHD12BQ7Z5M8 362 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR6N1Q8NGY5 312 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 TNFAIP8L1Q8WVP5 186 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 FXYD6Q9H0Q3 95 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 RABL2AQ9UBK7 228 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 RABL2BQ9UNT1 228 aa12.48□□□□□ -0.41
PCDHGA3-202ENST00000612467 A0A1B0GTI1 187 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 PLSCR5A0PG75 271 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 SULT2B1O00204 365 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 CCSO14618 274 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ISG15P05161 165 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF250P15622 560 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 HSD11B1P28845 292 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 FAUP35544 74 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 MMP16P51512 607 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF121P58317 390 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 TMEM244Q5VVB8 128 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF704Q6ZNC4 412 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 LRRC18Q8N456 261 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR8B12Q8NGG6 310 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR5D18Q8NGL1 313 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 SLC22A8Q8TCC7 542 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 LIN37Q96GY3 246 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 POTEKPQ9BYX7 375 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 BANF2Q9H503 90 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 GPN1Q9HCN4 374 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 PRELID1Q9Y255 219 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 RAB27BO00194 218 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 VSIG8P0DPA2 414 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF43P17038 809 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 BDKRB2P30411 391 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 SGCAQ16586 387 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 C11orf88Q6PI97 169 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 FAM57BQ71RH2 274 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 FJX1Q86VR8 437 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR2AK2Q8NG84 335 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 OR1M1Q8NGA1 313 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ELP5Q8TE02 316 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 ZNF385AQ96PM9 386 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 UTP23Q9BRU9 249 aaKnown RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 CLEC4MQ9H2X3 399 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 GPR84Q9NQS5 396 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 COQ3Q9NZJ6 369 aa12.47□□□□□ -0.41
PCDHGA3-202ENST00000612467 A0A1W2PNV4 684 aa12.46□□□□□ -0.41
PCDHGA3-202ENST00000612467 IGHG1P01857 330 aa12.46□□□□□ -0.41
PCDHGA3-202ENST00000612467 IL5P05113 134 aa12.46□□□□□ -0.41
PCDHGA3-202ENST00000612467 LPLP06858 475 aa12.46□□□□□ -0.41
PCDHGA3-202ENST00000612467 GABRA1P14867 456 aa12.46□□□□□ -0.41
PCDHGA3-202ENST00000612467 CFPP27918 469 aa12.46□□□□□ -0.41
PCDHGA3-202ENST00000612467 TAF13Q15543 124 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms