RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 DRC3Q9H069 523 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 RACGAP1Q9H0H5 632 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 OR51B6Q9H340 312 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 SAV1Q9H4B6 383 aaPredicted RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 PRSS16Q9NQE7 514 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 OR2S2Q9NQN1 319 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 EXD2Q9NVH0 621 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC25A37Q9NYZ2 338 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 DEC1Q9P2X7 70 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 MRM2Q9UI43 246 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 TRAPPC4Q9Y296 219 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 HEBP2Q9Y5Z4 205 aa2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 MRPS18BQ9Y676 258 aaKnown RBP2.79□□□□□ -1.96
SMCHD1-213ENST00000609587 JCADQ9P266 1359 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 A0A0A6YYH2 397 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 A6NJ64 397 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ARGFXA6NJG6 315 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PRAMEF26H0Y7S4 382 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PGRMC1O00264 195 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 RAB29O14966 203 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC31A2O15432 143 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 DENRO43583 198 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 GATCO43716 136 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CHST1O43916 411 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 MGRN1O60291 552 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 VAMP5O95183 116 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 IFNA6P05013 189 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PCCAP05165 728 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CT62P0C5K7 136 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF43P17038 809 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 MSNP26038 577 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PSMB5P28074 263 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 HNRNPH3P31942 346 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 VHLP40337 213 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ACTR1BP42025 376 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CAPZBP47756 277 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 RPL14P50914 215 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 RPL10AP62906 217 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PSG5Q15238 335 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 EXOC3L4Q17RC7 722 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 C5orf47Q569G3 176 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF691Q5VV52 312 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC8B1Q6J4K2 584 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 LCN12Q6JVE5 192 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CNIH2Q6PI25 160 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CLEC18BQ6UXF7 455 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PLEKHG7Q6ZR37 379 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF621Q6ZSS3 439 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 Q6ZVH6 145 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 HDDC2Q7Z4H3 204 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 THOC6Q86W42 341 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC13A5Q86YT5 568 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 GID4Q8IVV7 300 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ENTHD1Q8IYW4 607 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 IQCKQ8N0W5 287 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 TMEM104Q8NE00 496 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 FBXO36Q8NEA4 188 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 OR51G1Q8NGK1 321 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 OR2L8Q8NGY9 312 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 OR2G3Q8NGZ4 309 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ACTL9Q8TC94 416 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 STMN2Q93045 179 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CCDC124Q96CT7 223 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 FAM210BQ96KR6 192 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CEP19Q96LK0 163 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 C9orf72Q96LT7 481 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ZNF285Q96NJ3 590 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 OPALINQ96PE5 141 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 TAAR1Q96RJ0 339 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SDHCQ99643 169 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CGREF1Q99674 301 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 MAP1LC3CQ9BXW4 147 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 ILKAPQ9H0C8 392 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 CENPHQ9H3R5 247 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC38A10Q9HBR0 1119 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SLC40A1Q9NP59 571 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PXMP2Q9NR77 195 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 SAMSN1Q9NSI8 373 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 LYARQ9NX58 379 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 XCL2Q9UBD3 114 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 PITPNC1Q9UKF7 332 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 IKZF2Q9UKS7 526 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 RAB23Q9ULC3 237 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 FADS3Q9Y5Q0 445 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 NACADO15069 1562 aa2.78□□□□□ -1.96
SMCHD1-213ENST00000609587 LRPPRCP42704 1394 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 ROCK1Q13464 1354 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 LTBP1Q14766 1721 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 KBTBD11-OT1A0A1B0GTJ5 212 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 RAB19A4D1S5 217 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 LRRN3E7EW58 273 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 GOLGA6L19H0YKK7 550 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 LAD1O00515 517 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 AIM2O14862 343 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 PSTPIP1O43586 416 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 SNAI2O43623 268 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 ZMPSTE24O75844 475 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 SCELO95171 688 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 C1orf105O95561 183 aa2.77□□□□□ -1.97
SMCHD1-213ENST00000609587 TMEM50AO95807 157 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms