RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 SYNPRQ8TBG9 265 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 THEM6Q8WUY1 208 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 APOBEC3DQ96AK3 386 aaPredicted RBP12.27□□□□□ -0.45
CTSA-211ENST00000606066 Q96MT0 163 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 ZNF582Q96NG8 517 aaPredicted RBP12.27□□□□□ -0.45
CTSA-211ENST00000606066 MNTQ99583 582 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 ABHD6Q9BV23 337 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 CACNG6Q9BXT2 260 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 GSX2Q9BZM3 304 aa12.27□□□□□ -0.45
CTSA-211ENST00000606066 ZNF701Q9NV72 531 aaPredicted RBP12.27□□□□□ -0.45
CTSA-211ENST00000606066 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
CTSA-211ENST00000606066 FLNAP21333 2647 aaKnown RBP12.26□□□□□ -0.45
CTSA-211ENST00000606066 FBN3Q75N90 2809 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 M0R135 149 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 PHYHO14832 338 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 NGFP01138 241 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 MRPL3P09001 348 aaKnown RBP12.26□□□□□ -0.45
CTSA-211ENST00000606066 PSKH1P11801 424 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 HSD11B1P28845 292 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 ATP6V1E1P36543 226 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 CDKN1AP38936 164 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 KLF3P57682 345 aaPredicted RBP12.26□□□□□ -0.45
CTSA-211ENST00000606066 PPP1CBP62140 327 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 RIPK1Q13546 671 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 OCLNQ16625 522 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 KCTD18Q6PI47 426 aaPredicted RBP12.26□□□□□ -0.45
CTSA-211ENST00000606066 DRAM2Q6UX65 266 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 RFPL4BQ6ZWI9 263 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.26□□□□□ -0.45
CTSA-211ENST00000606066 DHRSXQ8N5I4 330 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 OR10S1Q8NGN2 331 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 SLC25A40Q8TBP6 338 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 RNF133Q8WVZ7 376 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 UBE2FQ969M7 185 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 ZNF799Q96GE5 643 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 DOK1Q99704 481 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 KCNJ15Q99712 375 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 MRPL37Q9BZE1 423 aaKnown RBP12.26□□□□□ -0.45
CTSA-211ENST00000606066 VCX3BQ9H321 246 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 SP140LQ9H930 580 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 SLCO1C1Q9NYB5 712 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 DNAJC27Q9NZQ0 273 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 JMJD1CQ15652 2540 aa12.26□□□□□ -0.45
CTSA-211ENST00000606066 H7C417 338 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 DLGAP1O14490 977 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 MT-ND5P03915 603 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 LCATP04180 440 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 ERCC1P07992 297 aaPredicted RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 H2BFMP0C1H6 154 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 ACSM4P0C7M7 580 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 ALOX5APP20292 161 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 SLC6A9P48067 706 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 PTH2RP49190 550 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 ERVS71-1P61550 626 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 RSPO1Q2MKA7 263 aaPredicted RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 MBNL2Q5VZF2 373 aaKnown RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 SPATC1Q76KD6 591 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 ENTHD1Q8IYW4 607 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 OR51G2Q8NGK0 314 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 RHOXF1Q8NHV9 184 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 KLF14Q8TD94 323 aaPredicted RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 CYGBQ8WWM9 190 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 ASB17Q8WXJ9 295 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 PERPQ96FX8 193 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 MARS2Q96GW9 593 aaKnown RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 SYT3Q9BQG1 590 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 C1QTNF5Q9BXJ0 243 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 OR2J1Q9GZK6 312 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 MS4A5Q9H3V2 200 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 BARX1Q9HBU1 254 aaPredicted RBP12.25□□□□□ -0.45
CTSA-211ENST00000606066 ADGRL4Q9HBW9 690 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 DYNLRB1Q9NP97 96 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 CLN6Q9NWW5 311 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 FZR1Q9UM11 496 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 CADP27708 2225 aa12.25□□□□□ -0.45
CTSA-211ENST00000606066 IGLV3-9A0A075B6K5 115 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 TMEM129A0AVI4 362 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 H0YAE9 185 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 M0R233 179 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 RRP9O43818 475 aaKnown RBP12.24□□□□□ -0.45
CTSA-211ENST00000606066 ENTPD6O75354 484 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 IGHV3-13P01766 116 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 SBK2P0C263 348 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 OTX1P32242 354 aaPredicted RBP12.24□□□□□ -0.45
CTSA-211ENST00000606066 LIPAP38571 399 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 OPRL1P41146 370 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 MTNR1AP48039 350 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 PPOXP50336 477 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 PRKXP51817 358 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 ATP5J2P56134 94 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 IL5RAQ01344 420 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 MALLQ13021 153 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 IL18R1Q13478 541 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 NKPD1Q17RQ9 610 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 SPATA46Q5T0L3 261 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 DEGS2Q6QHC5 323 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 COLCA1Q6ZS62 124 aa12.24□□□□□ -0.45
CTSA-211ENST00000606066 KRT77Q7Z794 578 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms