RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 MS4A15Q8N5U1 240 aa8.82□□□□□ -1
UPF1-213ENST00000601981 SLC26A10Q8NG04 563 aa8.82□□□□□ -1
UPF1-213ENST00000601981 OR1K1Q8NGR3 316 aa8.82□□□□□ -1
UPF1-213ENST00000601981 MCHR2Q969V1 340 aa8.82□□□□□ -1
UPF1-213ENST00000601981 PGLYRP3Q96LB9 341 aa8.82□□□□□ -1
UPF1-213ENST00000601981 CDADC1Q9BWV3 514 aa8.82□□□□□ -1
UPF1-213ENST00000601981 TTTY10Q9BZA0 68 aa8.82□□□□□ -1
UPF1-213ENST00000601981 MRM2Q9UI43 246 aaKnown RBP8.82□□□□□ -1
UPF1-213ENST00000601981 COA3Q9Y2R0 106 aaPredicted RBP8.82□□□□□ -1
UPF1-213ENST00000601981 A0A075B6Q4 140 aa8.81□□□□□ -1
UPF1-213ENST00000601981 PRR32B1ATL7 298 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ZNF593O00488 134 aaPredicted RBP8.81□□□□□ -1
UPF1-213ENST00000601981 SC5DO75845 299 aa8.81□□□□□ -1
UPF1-213ENST00000601981 CDRT1O95170 752 aa8.81□□□□□ -1
UPF1-213ENST00000601981 GPANK1O95872 356 aa8.81□□□□□ -1
UPF1-213ENST00000601981 OR8G3PP0DMU2 310 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ZNF823P16415 610 aa8.81□□□□□ -1
UPF1-213ENST00000601981 RPS19P39019 145 aaKnown RBP8.81□□□□□ -1
UPF1-213ENST00000601981 OPRL1P41146 370 aa8.81□□□□□ -1
UPF1-213ENST00000601981 RORCP51449 518 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ZNF133P52736 654 aaPredicted RBP8.81□□□□□ -1
UPF1-213ENST00000601981 ADAM8P78325 824 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ARF1P84077 181 aaKnown RBP8.81□□□□□ -1
UPF1-213ENST00000601981 ROM1Q03395 351 aa8.81□□□□□ -1
UPF1-213ENST00000601981 FMODQ06828 376 aa8.81□□□□□ -1
UPF1-213ENST00000601981 SLC3A1Q07837 685 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ZNF846Q147U1 533 aa8.81□□□□□ -1
UPF1-213ENST00000601981 TSC22D1Q15714 1073 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ETFDHQ16134 617 aa8.81□□□□□ -1
UPF1-213ENST00000601981 PCK2Q16822 640 aa8.81□□□□□ -1
UPF1-213ENST00000601981 TBRG1Q3YBR2 411 aa8.81□□□□□ -1
UPF1-213ENST00000601981 C10orf128Q5T292 105 aa8.81□□□□□ -1
UPF1-213ENST00000601981 PAMR1Q6UXH9 720 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ZNF813Q6ZN06 617 aa8.81□□□□□ -1
UPF1-213ENST00000601981 TMEM91Q6ZNR0 172 aa8.81□□□□□ -1
UPF1-213ENST00000601981 GLB1L2Q8IW92 636 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ACBD4Q8NC06 268 aa8.81□□□□□ -1
UPF1-213ENST00000601981 LINC01560Q8TB33 94 aa8.81□□□□□ -1
UPF1-213ENST00000601981 SLC25A46Q96AG3 418 aa8.81□□□□□ -1
UPF1-213ENST00000601981 ZC3HAV1LQ96H79 300 aaKnown RBP8.81□□□□□ -1
UPF1-213ENST00000601981 BOD1Q96IK1 185 aa8.81□□□□□ -1
UPF1-213ENST00000601981 WFIKKN1Q96NZ8 548 aa8.81□□□□□ -1
UPF1-213ENST00000601981 OR8B4Q96RC9 309 aa8.81□□□□□ -1
UPF1-213ENST00000601981 DCLRE1CQ96SD1 692 aaKnown RBP8.81□□□□□ -1
UPF1-213ENST00000601981 WDR12Q9GZL7 423 aaKnown RBP8.81□□□□□ -1
UPF1-213ENST00000601981 PLGRKTQ9HBL7 147 aa8.81□□□□□ -1
UPF1-213ENST00000601981 HMG20AQ9NP66 347 aa8.81□□□□□ -1
UPF1-213ENST00000601981 AKIP1Q9NQ31 210 aa8.81□□□□□ -1
UPF1-213ENST00000601981 SLC17A5Q9NRA2 495 aa8.81□□□□□ -1
UPF1-213ENST00000601981 CRIM1Q9NZV1 1036 aa8.81□□□□□ -1
UPF1-213ENST00000601981 KCNG2Q9UJ96 466 aa8.81□□□□□ -1
UPF1-213ENST00000601981 FBXL3Q9UKT7 428 aa8.81□□□□□ -1
UPF1-213ENST00000601981 GRIP1Q9Y3R0 1128 aa8.81□□□□□ -1
UPF1-213ENST00000601981 CRYBG3Q68DQ2 2970 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ADGRG4Q8IZF6 3080 aa8.8□□□□□ -1
UPF1-213ENST00000601981 CELSR2Q9HCU4 2923 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ARPC4-TTLL3A0A0A6YYG9 625 aa8.8□□□□□ -1
UPF1-213ENST00000601981 IGKV1D-43A0A0B4J1Z2 117 aa8.8□□□□□ -1
UPF1-213ENST00000601981 TRBV2A0A0J9YWF9 115 aa8.8□□□□□ -1
UPF1-213ENST00000601981 IQCMA0A1B0GVH7 501 aa8.8□□□□□ -1
UPF1-213ENST00000601981 A0A1W2PPL8 197 aa8.8□□□□□ -1
UPF1-213ENST00000601981 CLDN25C9JDP6 229 aa8.8□□□□□ -1
UPF1-213ENST00000601981 MAGEB4O15481 346 aaPredicted RBP8.8□□□□□ -1
UPF1-213ENST00000601981 UBL3O95164 117 aa8.8□□□□□ -1
UPF1-213ENST00000601981 SPARCP09486 303 aa8.8□□□□□ -1
UPF1-213ENST00000601981 PSKH1P11801 424 aa8.8□□□□□ -1
UPF1-213ENST00000601981 B4GALT1P15291 398 aa8.8□□□□□ -1
UPF1-213ENST00000601981 MTNR1BP49286 362 aa8.8□□□□□ -1
UPF1-213ENST00000601981 BMXP51813 675 aa8.8□□□□□ -1
UPF1-213ENST00000601981 MRPS34P82930 218 aaKnown RBP8.8□□□□□ -1
UPF1-213ENST00000601981 SNTB1Q13884 538 aaKnown RBP8.8□□□□□ -1
UPF1-213ENST00000601981 TAB1Q15750 504 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ZNF829Q3KNS6 432 aaPredicted RBP8.8□□□□□ -1
UPF1-213ENST00000601981 BEX5Q5H9J7 111 aa8.8□□□□□ -1
UPF1-213ENST00000601981 PHYHD1Q5SRE7 291 aa8.8□□□□□ -1
UPF1-213ENST00000601981 LIPNQ5VXI9 398 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ALKBH2Q6NS38 261 aa8.8□□□□□ -1
UPF1-213ENST00000601981 FDX2Q6P4F2 183 aa8.8□□□□□ -1
UPF1-213ENST00000601981 KCTD18Q6PI47 426 aaPredicted RBP8.8□□□□□ -1
UPF1-213ENST00000601981 LRFN4Q6PJG9 635 aa8.8□□□□□ -1
UPF1-213ENST00000601981 SLC25A47Q6Q0C1 308 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ZNF627Q7L945 461 aa8.8□□□□□ -1
UPF1-213ENST00000601981 LINGO2Q7L985 606 aa8.8□□□□□ -1
UPF1-213ENST00000601981 WFDC8Q8IUA0 241 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ZNF679Q8IYX0 411 aa8.8□□□□□ -1
UPF1-213ENST00000601981 MFSD4AQ8N468 514 aa8.8□□□□□ -1
UPF1-213ENST00000601981 SLC22A24Q8N4F4 322 aa8.8□□□□□ -1
UPF1-213ENST00000601981 YIPF7Q8N8F6 280 aa8.8□□□□□ -1
UPF1-213ENST00000601981 OR52N5Q8NH56 324 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ABHD4Q8TB40 342 aa8.8□□□□□ -1
UPF1-213ENST00000601981 THEM6Q8WUY1 208 aa8.8□□□□□ -1
UPF1-213ENST00000601981 PHYHIPQ92561 330 aa8.8□□□□□ -1
UPF1-213ENST00000601981 NSMAFQ92636 917 aa8.8□□□□□ -1
UPF1-213ENST00000601981 BCL2L2Q92843 193 aaPredicted RBP8.8□□□□□ -1
UPF1-213ENST00000601981 GHSRQ92847 366 aa8.8□□□□□ -1
UPF1-213ENST00000601981 BORCS5Q969J3 196 aa8.8□□□□□ -1
UPF1-213ENST00000601981 RNF166Q96A37 237 aaPredicted RBP8.8□□□□□ -1
UPF1-213ENST00000601981 NELFAQ9H3P2 528 aa8.8□□□□□ -1
UPF1-213ENST00000601981 ESRP2Q9H6T0 727 aaKnown RBP8.8□□□□□ -1
UPF1-213ENST00000601981 SEC61A2Q9H9S3 476 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms