RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 ELMOD2Q8IZ81 293 aa15.74■□□□□ 0.11
VRK3-225ENST00000601912 AKR7LQ8NHP1 331 aa15.74■□□□□ 0.11
VRK3-225ENST00000601912 TSEN15Q8WW01 171 aaKnown RBP15.74■□□□□ 0.11
VRK3-225ENST00000601912 NANOS1Q8WY41 292 aaKnown RBP15.74■□□□□ 0.11
VRK3-225ENST00000601912 STARD4Q96DR4 205 aa15.74■□□□□ 0.11
VRK3-225ENST00000601912 SLIRPQ9GZT3 109 aaKnown RBP15.74■□□□□ 0.11
VRK3-225ENST00000601912 HHLA2Q9UM44 414 aa15.74■□□□□ 0.11
VRK3-225ENST00000601912 OR6C6A6NF89 314 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 UBL3O95164 117 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 ANXA2P07355 339 aaKnown RBP15.73■□□□□ 0.11
VRK3-225ENST00000601912 ACHEP22303 614 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 IGHV1-2P23083 117 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 OTX1P32242 354 aaPredicted RBP15.73■□□□□ 0.11
VRK3-225ENST00000601912 HTR5AP47898 357 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 SLC6A9P48067 706 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 TPTEP56180 551 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 ZNF404Q494X3 552 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 PABPC1L2AQ5JQF8 200 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 FAM27D1Q5T7N8 215 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 TMEM53Q6P2H8 277 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 TPRA1Q86W33 373 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 FGFBP3Q8TAT2 258 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 BCL2L2Q92843 193 aaPredicted RBP15.73■□□□□ 0.11
VRK3-225ENST00000601912 SLC25A46Q96AG3 418 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 DERL3Q96Q80 235 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 WNT5BQ9H1J7 359 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 PPIL3Q9H2H8 161 aaKnown RBP15.73■□□□□ 0.11
VRK3-225ENST00000601912 SLC24A3Q9HC58 644 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 NOX4Q9NPH5 578 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 N6AMT1Q9Y5N5 214 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 TRAV1-2A0A0B4J238 106 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 A0A1W2PPK0 400 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 CIB4A0PJX0 185 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 M0R135 149 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 HLA-HP01893 362 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 RAF1P04049 648 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 GLI4P10075 376 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 CD79AP11912 226 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 CEACAM8P31997 349 aaPredicted RBP15.73■□□□□ 0.11
VRK3-225ENST00000601912 DRAM2Q6UX65 266 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 BEND4Q6ZU67 534 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 CCDC36Q8IYA8 594 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 RPRMLQ8N4K4 120 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 MCFD2Q8NI22 146 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 ZNF799Q96GE5 643 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 DACH2Q96NX9 599 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 SFXN3Q9BWM7 321 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 MMP27Q9H306 513 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 ZNF224Q9NZL3 707 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 ATPIF1Q9UII2 106 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 DHDHQ9UQ10 334 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 A3GALT2U3KPV4 340 aa15.73■□□□□ 0.11
VRK3-225ENST00000601912 CGAP01215 116 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 TTRP02766 147 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 CD2P06729 351 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 SLC2A1P11166 492 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 CRYGSP22914 178 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 SOX2P48431 317 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 PLP2Q04941 152 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 LY6DQ14210 128 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 FAM57BQ71RH2 274 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 OR10AC1Q8NH08 325 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 SLITRK2Q9H156 845 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 SP140LQ9H930 580 aa15.72■□□□□ 0.11
VRK3-225ENST00000601912 DSPP15924 2871 aaKnown RBP15.71■□□□□ 0.11
VRK3-225ENST00000601912 LOC107986453A0A1B0GWG9 222 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 P2RY10O00398 339 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 CLEC2LP0C7M8 214 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 SRMP19623 302 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 RAB1AP62820 205 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 HNRNPA0Q13151 305 aaKnown RBP15.71■□□□□ 0.11
VRK3-225ENST00000601912 RSPO1Q2MKA7 263 aaPredicted RBP15.71■□□□□ 0.11
VRK3-225ENST00000601912 TBRG1Q3YBR2 411 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 HIKESHIQ53FT3 197 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 ZGRF1Q86YA3 2104 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 ZNF433Q8N7K0 673 aaPredicted RBP15.71■□□□□ 0.11
VRK3-225ENST00000601912 ZNF610Q8N9Z0 462 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 NAXEQ8NCW5 288 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 OR8B12Q8NGG6 310 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 OR51A4Q8NGJ6 313 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 SLC7A6Q92536 515 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 TMEM106AQ96A25 262 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 PGAM5Q96HS1 289 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 SLC17A5Q9NRA2 495 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 TINAGQ9UJW2 476 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 PMF1-BGLAPU3KQ54 211 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 SPTA1P02549 2419 aa15.71■□□□□ 0.11
VRK3-225ENST00000601912 A0A1B0GVI7 797 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 SHISA3A0PJX4 238 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 H3BSH0 61 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 SYT7O43581 403 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 RAD51DO75771 328 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 LYZL6O75951 148 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 DBHP09172 617 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 ACSM4P0C7M7 580 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 COX5BP10606 129 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 HOXB1P14653 301 aaPredicted RBP15.7■□□□□ 0.1
VRK3-225ENST00000601912 COX5AP20674 150 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 OPRM1P35372 400 aa15.7■□□□□ 0.1
VRK3-225ENST00000601912 MAGEB1P43366 347 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms