RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SGCEO43556 437 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 SLC16A7O60669 478 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 CD55P08174 381 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 POU1F1P28069 291 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 ACTR3P61158 418 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 TNFAIP6P98066 277 aaPredicted RBP15.86■□□□□ 0.13
PNKP-213ENST00000599543 ATP6AP1Q15904 470 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 C12orf54Q6X4T0 127 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 C1orf229Q6ZS94 237 aaPredicted RBP15.86■□□□□ 0.13
PNKP-213ENST00000599543 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.86■□□□□ 0.13
PNKP-213ENST00000599543 OR52L1Q8NGH7 329 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 TMPRSS13Q9BYE2 586 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 TBCCD1Q9NVR7 557 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 KLHL21Q9UJP4 597 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 PCDHB10Q9UN67 800 aa15.86■□□□□ 0.13
PNKP-213ENST00000599543 DCTN6O00399 190 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 TXNDC12O95881 172 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 AVPP01185 164 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 TUBG1P23258 451 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 TNFSF4P23510 183 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 GATA3P23771 443 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 FASP25445 335 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 NOS3P29474 1203 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 CENPAP49450 140 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 PSG7Q13046 419 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 AQP6Q13520 282 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 SLC36A3Q495N2 470 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 VASH1Q7L8A9 365 aaPredicted RBP15.85■□□□□ 0.13
PNKP-213ENST00000599543 C1QL2Q7Z5L3 287 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 JAZF1Q86VZ6 243 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 ATG16L2Q8NAA4 619 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 CYB561A3Q8NBI2 242 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 OR52E2Q8NGJ4 325 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 ST7LQ8TDW4 575 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 DUS3LQ96G46 650 aaKnown RBP15.85■□□□□ 0.13
PNKP-213ENST00000599543 NUAK2Q9H093 628 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 SRA1Q9HD15 236 aaKnown RBP15.85■□□□□ 0.13
PNKP-213ENST00000599543 TUBG2Q9NRH3 451 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 PLEK2Q9NYT0 353 aa15.85■□□□□ 0.13
PNKP-213ENST00000599543 COA3Q9Y2R0 106 aaPredicted RBP15.85■□□□□ 0.13
PNKP-213ENST00000599543 SAC3D1A6NKF1 404 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 H3BN98 237 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 BHLHE40O14503 412 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 HOXB6P17509 224 aaKnown RBP15.84■□□□□ 0.13
PNKP-213ENST00000599543 HILS1P60008 231 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 ACTG1P63261 375 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.84■□□□□ 0.13
PNKP-213ENST00000599543 USP43Q70EL4 1123 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 OR5K1Q8NHB7 308 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 NANPQ8TBE9 248 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 COG8Q96MW5 612 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 RAB3IPQ96QF0 476 aaPredicted RBP15.84■□□□□ 0.13
PNKP-213ENST00000599543 PKP2Q99959 881 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 RPRD1BQ9NQG5 326 aaKnown RBP15.84■□□□□ 0.13
PNKP-213ENST00000599543 IL20Q9NYY1 176 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 VSX1Q9NZR4 365 aaPredicted RBP15.84■□□□□ 0.13
PNKP-213ENST00000599543 KIF17Q9P2E2 1029 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 ASH2LQ9UBL3 628 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 PURGQ9UJV8 347 aaKnown RBP15.84■□□□□ 0.13
PNKP-213ENST00000599543 NPTNQ9Y639 398 aa15.84■□□□□ 0.13
PNKP-213ENST00000599543 OR6C68A6NDL8 312 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 H3BNX3 289 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 ARPC3O15145 178 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 MITFO75030 526 aaPredicted RBP15.83■□□□□ 0.12
PNKP-213ENST00000599543 ADRA2CP18825 462 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 TNFRSF1AP19438 455 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 DAPP51397 102 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 LCN2P80188 198 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 CDK5R2Q13319 367 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 MEP1BQ16820 701 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 SPRNQ5BIV9 151 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 ADCK1Q86TW2 530 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 GLB1L2Q8IW92 636 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 OR2Z1Q8NG97 314 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 JMJD8Q96S16 334 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 POFUT1Q9H488 388 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 C7orf69Q9H7B7 122 aa15.83■□□□□ 0.12
PNKP-213ENST00000599543 ARRDC5A6NEK1 342 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 TRIM77I1YAP6 450 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 KHDRBS3O75525 346 aaKnown RBP15.82■□□□□ 0.12
PNKP-213ENST00000599543 RENP00797 406 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 KITLGP21583 273 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 PYCR1P32322 319 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 LSM6P62312 80 aaKnown RBP15.82■□□□□ 0.12
PNKP-213ENST00000599543 GK3PQ14409 553 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 TMEM236Q5W0B7 351 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 RPL13AP3Q6NVV1 102 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 BPIFB2Q8N4F0 458 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 SPICQ8N5J4 248 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 OR9Q1Q8NGQ5 310 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 TEX47Q8TBZ9 253 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 CMBLQ96DG6 245 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 DCLRE1CQ96SD1 692 aaKnown RBP15.82■□□□□ 0.12
PNKP-213ENST00000599543 SUCNR1Q9BXA5 334 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 ZNF556Q9HAH1 456 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 TMEM106BQ9NUM4 274 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 DCAF16Q9NXF7 216 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 POLR1DQ9Y2S0 133 aa15.82■□□□□ 0.12
PNKP-213ENST00000599543 G3V2T6 193 aa15.81■□□□□ 0.12
PNKP-213ENST00000599543 SURF4O15260 269 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms