RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 TRBV4-1A0A0J9YWV2 114 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 KIR2DS1A0A191URI9 304 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 ENTPD5O75356 428 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 FARS2O95363 451 aaKnown RBP11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 MMP7P09237 267 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 NR2C1P13056 603 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 ZNF26P17031 533 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 GNB2P62879 340 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 CD47Q08722 323 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 SEC23BQ15437 767 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 SLC36A2Q495M3 483 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 PABPC1L2AQ5JQF8 200 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 GPR157Q5UAW9 335 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 CLDN22Q8N7P3 220 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 ZSCAN4Q8NAM6 433 aaPredicted RBP11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 PCGF1Q9BSM1 259 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 FUZQ9BT04 418 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 ALG12Q9BV10 488 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 CYSLTR2Q9NS75 346 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 UGT2A1Q9Y4X1 527 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 POMT1Q9Y6A1 747 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 RYR2Q92736 4967 aa11.44□□□□□ -0.58
SHKBP1-208ENST00000595726 C5orf49A4QMS7 147 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 B2RBV5 119 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 SFTPBP07988 381 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 RPS2P15880 293 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 ATP6V1B2P21281 511 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 CALB2P22676 271 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 STOMP27105 288 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 CDAP32320 146 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 MDH2P40926 338 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 OMPP47874 163 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 MRPS34P82930 218 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 HSF2Q03933 536 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 CDK5R2Q13319 367 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 ZBED5Q49AG3 693 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 MBNL2Q5VZF2 373 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 SLC25A47Q6Q0C1 308 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 RFPL4BQ6ZWI9 263 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 KLBQ86Z14 1044 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 OR2Z1Q8NG97 314 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 OR52J3Q8NH60 311 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 TBC1D15Q8TC07 691 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 SGCDQ92629 289 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 NABP1Q96AH0 204 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 ITPKCQ96DU7 683 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 NSL1Q96IY1 281 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 POM121L2Q96KW2 1035 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 NUDT16L1Q9BRJ7 211 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 CDADC1Q9BWV3 514 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 TMEM165Q9HC07 324 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 PPP1R3CQ9UQK1 317 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 SIGLEC7Q9Y286 467 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 ADAM18Q9Y3Q7 739 aa11.43□□□□□ -0.58
SHKBP1-208ENST00000595726 ZNF816-ZNF321PA0A0X1KG74 233 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 A6NIZ1 184 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 TMEM178BH3BS89 294 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 TNFRSF13BO14836 293 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 FABP3P05413 133 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 T-ENOLP0DO92 83 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 LIPAP38571 399 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 FXYD6P3P58550 94 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 RAP1BP61224 184 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 PPP1CBP62140 327 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 RAP1AP62834 184 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 ERVK-25P63136 954 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 SPIBQ01892 262 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 EGR3Q06889 387 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 PSG7Q13046 419 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 MESTQ5EB52 335 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 SLC27A4Q6P1M0 643 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 Q6ZR03 302 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 FAM122BQ7Z309 247 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 DPPA2Q7Z7J5 298 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 C11orf44Q8N8P7 122 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 AKR7LQ8NHP1 331 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 ABHD4Q8TB40 342 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 FNDC8Q8TC99 324 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 ITLN1Q8WWA0 313 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 NSMAFQ92636 917 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 MCUR1Q96AQ8 359 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 RSRC1Q96IZ7 334 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 SAMD8Q96LT4 415 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 GPX7Q96SL4 187 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 IL1RAPQ9NPH3 570 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 ACTR3BQ9P1U1 418 aa11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 EIF3KQ9UBQ5 218 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-208ENST00000595726 CENPVL3A0A0U1RRI6 287 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 H7C1C5 153 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 TIMM8AO60220 97 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 MGRN1O60291 552 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 PTP4A3O75365 173 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 NDUFB2O95178 105 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 GADD45GO95257 159 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 CD14P08571 375 aa11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 RPL4P36578 427 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 RPL15P61313 204 aaKnown RBP11.41□□□□□ -0.58
SHKBP1-208ENST00000595726 LCN6P62502 163 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms