RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 APOC1P02654 83 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 ADRA2AP08913 450 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 CSF3P09919 207 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 PSKH1P11801 424 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 GGTLC2Q14390 218 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 DRAM2Q6UX65 266 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 SLC16A9Q7RTY1 509 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 RNF133Q8WVZ7 376 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 ZNF799Q96GE5 643 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 SORCS2Q96PQ0 1159 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 ABHD6Q9BV23 337 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 CYSLTR2Q9NS75 346 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 CENPMQ9NSP4 180 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 IMPAD1Q9NX62 359 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 MYEF2Q9P2K5 600 aaKnown RBP22.07■■□□□ 1.12
TRIM28-204ENST00000594806 STARD10Q9Y365 291 aa22.07■■□□□ 1.12
TRIM28-204ENST00000594806 TMED1Q13445 227 aa22.06■■□□□ 1.12
TRIM28-204ENST00000594806 CLEC12BQ2HXU8 276 aa22.06■■□□□ 1.12
TRIM28-204ENST00000594806 ZIK1Q3SY52 487 aaPredicted RBP22.06■■□□□ 1.12
TRIM28-204ENST00000594806 SPATA46Q5T0L3 261 aa22.06■■□□□ 1.12
TRIM28-204ENST00000594806 DCLRE1BQ9H816 532 aa22.06■■□□□ 1.12
TRIM28-204ENST00000594806 WARS2Q9UGM6 360 aaKnown RBP22.06■■□□□ 1.12
TRIM28-204ENST00000594806 TMEM14AQ9Y6G1 99 aa22.06■■□□□ 1.12
TRIM28-204ENST00000594806 CHD3Q12873 2000 aaKnown RBP22.06■■□□□ 1.12
TRIM28-204ENST00000594806 SSX4O60224 188 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 SELENOFO60613 162 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 LYNP07948 512 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 RAC2P15153 192 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 ALDH3B1P43353 468 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 TRIP10Q15642 601 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 SLC25A30Q5SVS4 291 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 FBXW12Q6X9E4 464 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 DNM1P46Q6ZS02 220 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 PACRGLQ8N7B6 248 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 FAM81AQ8TBF8 368 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 RFKQ969G6 155 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 Q96MF0 132 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 MNTQ99583 582 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 SP140LQ9H930 580 aa22.05■■□□□ 1.12
TRIM28-204ENST00000594806 M0R129 80 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 KITLGP21583 273 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 MPV17P39210 176 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 ELF3P78545 371 aaPredicted RBP22.04■■□□□ 1.12
TRIM28-204ENST00000594806 PCGF3Q3KNV8 242 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 ZMAT1Q5H9K5 638 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 HAVCR1Q96D42 359 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 CNN2Q99439 309 aaKnown RBP22.04■■□□□ 1.12
TRIM28-204ENST00000594806 NKIRAS2Q9NYR9 191 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 LAMP5Q9UJQ1 280 aa22.04■■□□□ 1.12
TRIM28-204ENST00000594806 PLSCR5A0PG75 271 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 C17orf100A8MU93 164 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 LCATP04180 440 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 ALOX5APP20292 161 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 NAA10P41227 235 aaPredicted RBP22.03■■□□□ 1.12
TRIM28-204ENST00000594806 SLC6A9P48067 706 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 SNRPGP62308 76 aaKnown RBP22.03■■□□□ 1.12
TRIM28-204ENST00000594806 POU4F2Q12837 409 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 MALLQ13021 153 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 PSG7Q13046 419 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 MEDAGQ5VYS4 303 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 CLEC2AQ6UVW9 174 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 THEM6Q8WUY1 208 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 CMBLQ96DG6 245 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 MBOAT4Q96T53 435 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 TMUB1Q9BVT8 246 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 NIPAL2Q9H841 368 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 SMPD3Q9NY59 655 aaPredicted RBP22.03■■□□□ 1.12
TRIM28-204ENST00000594806 GMPPBQ9Y5P6 360 aa22.03■■□□□ 1.12
TRIM28-204ENST00000594806 MED13LQ71F56 2210 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 MPZL2O60487 215 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 CD99P14209 185 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 FOSL1P15407 271 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 HSD11B1P28845 292 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 HTR1FP30939 366 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 OPRL1P41146 370 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 MAD2L1BPQ15013 274 aaPredicted RBP22.02■■□□□ 1.12
TRIM28-204ENST00000594806 KCTD18Q6PI47 426 aaPredicted RBP22.02■■□□□ 1.12
TRIM28-204ENST00000594806 DEGS2Q6QHC5 323 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 BCDIN3DQ7Z5W3 292 aaKnown RBP22.02■■□□□ 1.12
TRIM28-204ENST00000594806 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.02■■□□□ 1.12
TRIM28-204ENST00000594806 ASB17Q8WXJ9 295 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 DIRC2Q96SL1 478 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 RHNO1Q9BSD3 238 aa22.02■■□□□ 1.12
TRIM28-204ENST00000594806 PURGQ9UJV8 347 aaKnown RBP22.02■■□□□ 1.12
TRIM28-204ENST00000594806 F8P00451 2351 aa22.02■■□□□ 1.11
TRIM28-204ENST00000594806 SNTNA6NMZ2 147 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 PHYHO14832 338 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 CASQ2O14958 399 aaPredicted RBP22.01■■□□□ 1.11
TRIM28-204ENST00000594806 SLC16A6O15403 523 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 H2BFMP0C1H6 154 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 NAT2P11245 290 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 SELEP16581 610 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 MMP15P51511 669 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 ZCCHC24Q8N2G6 241 aaKnown RBP22.01■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF283Q8N7M2 679 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 ZNF582Q96NG8 517 aaPredicted RBP22.01■■□□□ 1.11
TRIM28-204ENST00000594806 POFUT1Q9H488 388 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 FAM118AQ9NWS6 357 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 ZDHHC8Q9ULC8 765 aa22.01■■□□□ 1.11
TRIM28-204ENST00000594806 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms