RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 ANKRD34CP0C6C1 535 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF728P0DKX0 622 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 CD79AP11912 226 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 BAMBIQ13145 260 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 OGFOD3Q6PK18 319 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 CDC20BQ86Y33 519 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 PRR18Q8N4B5 295 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 GJC3Q8NFK1 279 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 C7orf66A4D0T2 115 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 BCL2L11O43521 198 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 RNF4P78317 190 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 DMRTC1Q5HYR2 192 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 PRSS35Q8N3Z0 413 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 APOBEC4Q8WW27 367 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF285Q96NJ3 590 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 STRADBQ9C0K7 418 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 SLC5A6Q9Y289 635 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 WIF1Q9Y5W5 379 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 OR7C1O76099 320 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 DDAH2O95865 285 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 WNT11O96014 354 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 CHATP28329 748 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 FOXF1Q12946 379 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 H3F3CQ6NXT2 135 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 SLC16A14Q7RTX9 510 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 ADGRG3Q86Y34 549 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 NAXDQ8IW45 347 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 OR1S1Q8NH92 325 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 C8orf44Q96CB5 159 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 MOB1AQ9H8S9 216 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 TAF9BQ9HBM6 251 aa15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 FAM212BQ9NTI7 297 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-215ENST00000590574 TSC2P49815 1807 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 LILRA5A6NI73 299 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 TMEM229AB2RXF0 380 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 IGKV1D-16P01601 117 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 GDF1P27539 372 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 AVPR2P30518 371 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 ATG4DQ86TL0 474 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 GPR137Q96N19 417 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 CNTNAP3Q9BZ76 1288 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 ICAM5Q9UMF0 924 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 B3GALT5Q9Y2C3 310 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 MCRIP1C9JLW8 97 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 ERVH48-1M5A8F1 160 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 ATPIF1Q9UII2 106 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 TNFSF12O43508 249 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 MYF5P13349 255 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 CPN1P15169 458 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 HOXD11P31277 338 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 C9orf135Q5VTT2 229 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 C11orf87Q6NUJ2 197 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 FBXW12Q6X9E4 464 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 DOCK4Q8N1I0 1966 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 SUMF2Q8NBJ7 301 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 OR1N1Q8NGS0 311 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 TMEM231Q9H6L2 316 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 YBX2Q9Y2T7 364 aaKnown RBP15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 SHISA8B8ZZ34 492 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 SIGLEC6O43699 453 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 HLA-DQB1P01920 261 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF250P15622 560 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 SSR4P51571 173 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 TOMM34Q15785 309 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 CMBLQ96DG6 245 aa15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 GDF2Q9UK05 429 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 TMEM184BQ9Y519 407 aaPredicted RBP15.41■□□□□ 0.06
SMARCA4-215ENST00000590574 MYLKQ15746 1914 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 SCAND1P57086 179 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 RPS15P62841 145 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 KCNRGQ8N5I3 272 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 RRNAD1Q96FB5 475 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 PGLYRP3Q96LB9 341 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 GHITMQ9H3K2 345 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 EPPINO95925 133 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 GPR157Q5UAW9 335 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 SFTPA2Q8IWL1 248 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF709Q8N972 641 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 TET1Q8NFU7 2136 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 GLYATL2Q8WU03 294 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 C11orf40Q8WZ69 217 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 PCOLCE2Q9UKZ9 415 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 OR51B6Q9H340 312 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 CTSFQ9UBX1 484 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 ZNF629Q9UEG4 869 aaPredicted RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 MPZL1O95297 269 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 CTLA4P16410 223 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 CDAP32320 146 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 AGFG1P52594 562 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 NANOS3P60323 173 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 C19orf57Q0VDD7 668 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 ETFDHQ16134 617 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 C1QL3Q5VWW1 255 aa15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 PAPOLGQ9BWT3 736 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 NXT1Q9UKK6 140 aaKnown RBP15.4■□□□□ 0.06
SMARCA4-215ENST00000590574 TRAV8-7A0A075B6U6 113 aa15.39■□□□□ 0.05
SMARCA4-215ENST00000590574 SHISA3A0PJX4 238 aa15.39■□□□□ 0.05
SMARCA4-215ENST00000590574 EIF1BO60739 113 aaKnown RBP15.39■□□□□ 0.05
SMARCA4-215ENST00000590574 IFNA17P01571 189 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms