RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 KIAA1109Q2LD37 5005 aa5.09□□□□□ -1.59
VPS25-204ENST00000589577 HUWE1Q7Z6Z7 4374 aaKnown RBP5.09□□□□□ -1.6
VPS25-204ENST00000589577 IGLV3-9A0A075B6K5 115 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZNF816-ZNF321PA0A0X1KG74 233 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZC3H12DA2A288 527 aaKnown RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 A6NIZ1 184 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 LIPT2A6NK58 231 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SNTNA6NMZ2 147 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZNF726A6NNF4 738 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 RIIAD1A6NNX1 92 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 C11orf98E9PRG8 122 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 F5H0A9 414 aaPredicted RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 M0R082 166 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 CASQ2O14958 399 aaPredicted RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 XPNPEP2O43895 674 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 NPIPB7O75200 414 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 KRT33AO76009 404 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 IGHV2-70P01814 119 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 HMGN1P05114 100 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 OSMP13725 252 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 HOXB1P14653 301 aaPredicted RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 CBLP22681 906 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 PEX2P28328 305 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 P2RY4P51582 365 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 CDC42P60953 191 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 RAP1BP61224 184 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 RAP1AP62834 184 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 ROR2Q01974 943 aaKnown RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 HERPUD1Q15011 391 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 LAPTM4AQ15012 233 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 NKPD1Q17RQ9 610 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 HFEQ30201 348 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 PCGF3Q3KNV8 242 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TMEM255AQ5JRV8 349 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TTC23Q5W5X9 447 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 GPR139Q6DWJ6 353 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SLC27A4Q6P1M0 643 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 C1orf94Q6P1W5 598 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 PGBD2Q6P3X8 592 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TBPL2Q6SJ96 375 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SMARCD3Q6STE5 483 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 LINC00114Q6XXX2 140 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 RASSF6Q6ZTQ3 369 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 GALNT4Q8N4A0 578 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 CLDN22Q8N7P3 220 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TMEM99Q8N816 258 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 C11orf44Q8N8P7 122 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SETD9Q8NE22 299 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 IL17RDQ8NFM7 739 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 OR2T33Q8NG76 320 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 OR4C15Q8NGM1 316 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 OR51A7Q8NH64 312 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZNF417Q8TAU3 575 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 FNDC8Q8TC99 324 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SSMEM1Q8WWF3 244 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TAAR8Q969N4 342 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TIMD4Q96H15 378 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZNF587Q96SQ5 575 aaPredicted RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 APOL4Q9BPW4 351 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 PRSS27Q9BQR3 290 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 OCSTAMPQ9BR26 566 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 IFT27Q9BW83 186 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SF3B5Q9BWJ5 86 aaKnown RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 RIBC2Q9H4K1 309 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SAP30LQ9HAJ7 183 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 PATZ1Q9HBE1 687 aaKnown RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 B3GAT2Q9NPZ5 323 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 SMPD3Q9NY59 655 aaPredicted RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZNF224Q9NZL3 707 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 TAAR3PQ9P1P4 343 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 GRHPRQ9UBQ7 328 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 NKX1-2Q9UD57 310 aaPredicted RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 ZNF346Q9UL40 294 aaKnown RBP5.08□□□□□ -1.6
VPS25-204ENST00000589577 CDH10Q9Y6N8 788 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 U3KQK5 164 aa5.08□□□□□ -1.6
VPS25-204ENST00000589577 IGKV1D-42A0A075B6H8 117 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 TRAV27A0A087WT01 109 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 AQP7P3A6NL99 342 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 H0YJX3 145 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 RPL36A-HNRNPH2H7BZ11 118 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 IDH3BO43837 385 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 MPZL2O60487 215 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 TSPAN9O75954 239 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 ZNF432O94892 652 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 AKR7A3O95154 331 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 SOX14O95416 240 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 RENP00797 406 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 GASTP01350 101 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 HLA-HP01893 362 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 BGLAPP02818 100 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 THY1P04216 161 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 ALPLP05186 524 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 CD14P08571 375 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 ASAH2BP0C7U1 165 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 IGLL1P15814 213 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 ZNF3P17036 446 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 PRKACGP22612 351 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 OMPP47874 163 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 GSSP48637 474 aa5.07□□□□□ -1.6
VPS25-204ENST00000589577 PTDSS1P48651 473 aaKnown RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms