RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CIB4A0PJX0 185 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ZNF736B4DX44 427 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 H3BML4 177 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 PYCARD-AS1I3L0S3 204 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ETV2O00321 342 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 YKT6O15498 198 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 RAD1O60671 282 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 PMS2P2O95744 297 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ONECUT2O95948 504 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 WNT11O96014 354 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 MELTFP08582 738 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 CD37P11049 281 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 PTHLHP12272 177 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 HLA-DOBP13765 273 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 LAP3P28838 519 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 HSD11B1P28845 292 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 BDKRB2P30411 391 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SELENOPP49908 381 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 BIDP55957 195 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ZP1P60852 638 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 MFGE8Q08431 387 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 FGL1Q08830 312 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TAF13Q15543 124 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TMEM255AQ5JRV8 349 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 C1orf100Q5SVJ3 147 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 FAM69BQ5VUD6 431 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 LYSMD4Q5XG99 296 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 LIN54Q6MZP7 749 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SEZ6L2Q6UXD5 910 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 CCDC28AQ8IWP9 274 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SLC22A24Q8N4F4 322 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 OR51S1Q8NGJ8 323 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ST7LQ8TDW4 575 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ATOH1Q92858 354 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 ARL5BQ96KC2 179 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 B3GNT4Q9C0J1 378 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TTYH1Q9H313 450 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-206ENST00000589117 TAS2R4Q9NYW5 299 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SIT1Q9Y3P8 196 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 WIF1Q9Y5W5 379 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 NUP210LQ5VU65 1888 aa6.6□□□□□ -1.35
ZNF540-206ENST00000589117 SEC16AO15027 2179 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 ZNF726A6NNF4 738 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 C17orf51A8MQB3 221 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 HMSDA8MTL9 139 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 DISC1C4P0D8 188 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 SYT7O43581 403 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 MPZL1O95297 269 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 CD3DP04234 171 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 GSK3AP49840 483 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 EFNB2P52799 333 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 FOXF1Q12946 379 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 MYBPHQ13203 477 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 IL11RAQ14626 422 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 CLPPQ16740 277 aaPredicted RBP6.59□□□□□ -1.35
ZNF540-206ENST00000589117 CLLU1Q5K131 121 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 FAAP20Q6NZ36 180 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 ARSKQ6UWY0 536 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
ZNF540-206ENST00000589117 ZNF584Q8IVC4 421 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 GABRG1Q8N1C3 465 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 CLEC1AQ8NC01 280 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 OR4K17Q8NGC6 315 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 OR8S1Q8NH09 359 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 SLC25A28Q96A46 364 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 SLAMF6Q96DU3 332 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 SLC26A1Q9H2B4 701 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 CDIP1Q9H305 208 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 G6PC2Q9NQR9 355 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 HDGFL3Q9Y3E1 203 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 SPAG17Q6Q759 2223 aa6.59□□□□□ -1.35
ZNF540-206ENST00000589117 LOC390937A0A1W2PQ73 354 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF878C9JN71 531 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 F5H5P2 479 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SRSF10O75494 262 aaKnown RBP6.59□□□□□ -1.36
ZNF540-206ENST00000589117 KLK3P07288 261 aaPredicted RBP6.59□□□□□ -1.36
ZNF540-206ENST00000589117 MYF5P13349 255 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF20P17024 532 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF43P17038 809 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 RAB3AP20336 220 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 EPHA8P29322 1005 aaPredicted RBP6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SSTR2P30874 369 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 DHPSP49366 369 aaPredicted RBP6.59□□□□□ -1.36
ZNF540-206ENST00000589117 P2RX3P56373 397 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 DHODHQ02127 395 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SPOCK1Q08629 439 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 OPCMLQ14982 345 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 ZMYND11Q15326 602 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 STPG1Q5TH74 334 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 ZNF574Q6ZN55 896 aaPredicted RBP6.59□□□□□ -1.36
ZNF540-206ENST00000589117 PGAP1Q75T13 922 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SLC36A1Q7Z2H8 476 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 LINC00346Q8IVM7 164 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 ELMOD2Q8IZ81 293 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 EDAQ92838 391 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 FAM46BQ96A09 425 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 PNPLA2Q96AD5 504 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 FGGYQ96C11 551 aa6.59□□□□□ -1.36
ZNF540-206ENST00000589117 SEH1LQ96EE3 360 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms