RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 CDCA4Q9BXL8 241 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 RGCCQ9H4X1 137 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 OPA3Q9H6K4 179 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 CDH20Q9HBT6 801 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 SCN3BQ9NY72 215 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 UBAP1Q9NZ09 502 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 AASSQ9UDR5 926 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 BLOC1S6Q9UL45 172 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 KLHDC2Q9Y2U9 406 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 CAB39Q9Y376 341 aaPredicted RBP6.98□□□□□ -1.29
C19orf53-204ENST00000588858 EXOSC1Q9Y3B2 195 aaKnown RBP6.98□□□□□ -1.29
C19orf53-204ENST00000588858 TPRKBQ9Y3C4 175 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 NOTCH2Q04721 2471 aa6.98□□□□□ -1.29
C19orf53-204ENST00000588858 CELSR2Q9HCU4 2923 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 APCP25054 2843 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 HRNRQ86YZ3 2850 aaPredicted RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 A0A0U1RQV5 110 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 C5orf49A4QMS7 147 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 METTL15A6NJ78 407 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 VSTM5A8MXK1 200 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 PRR32B1ATL7 298 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ATP6V1G2-DDX39BF2Z307 99 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 SMPD2O60906 423 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 FAM20BO75063 409 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 KRT8P05787 483 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 CDK1P06493 297 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 RPSAP08865 295 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 MRPL3P09001 348 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 TACSTD2P09758 323 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 H2BFMP0C1H6 154 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ZNF250P15622 560 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 APOBEC3AP31941 199 aaPredicted RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 WNT5AP41221 380 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 RPS27P42677 84 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 CCR9P51686 369 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 RIDAP52758 137 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 GALK2Q01415 458 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ST3GAL4Q11206 333 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 SNTB1Q13884 538 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 IRF3Q14653 427 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 EFNB3Q15768 340 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ZNF829Q3KNS6 432 aaPredicted RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 MBNL2Q5VZF2 373 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 FBXW12Q6X9E4 464 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 C20orf204Q6ZNR8 217 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 KRT77Q7Z794 578 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 DTX2Q86UW9 622 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ZNF101Q8IZC7 436 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 PAQR4Q8N4S7 273 aaPredicted RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 CCDC54Q8NEL0 328 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 OR5L1Q8NGL2 311 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 OR52N1Q8NH53 320 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 RPS4Y2Q8TD47 263 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 THEM6Q8WUY1 208 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 TMEM171Q8WVE6 324 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 RNF166Q96A37 237 aaPredicted RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 SPSB4Q96A44 273 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 MARVELD3Q96A59 401 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 PIK3IP1Q96FE7 263 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 TMEM80Q96HE8 168 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 HS3ST6Q96QI5 342 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 DOK1Q99704 481 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 DHRS9Q9BPW9 319 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 COPS4Q9BT78 406 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 C1QTNF6Q9BXI9 259 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 PLEKHF2Q9H8W4 249 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 AMBNQ9NP70 447 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ERVK13-1Q9NX77 482 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 SLCO1C1Q9NYB5 712 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 EIF3KQ9UBQ5 218 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 CGGBP1Q9UFW8 167 aaPredicted RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 NUFIP1Q9UHK0 495 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 MRM2Q9UI43 246 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 LRCH1Q9Y2L9 728 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 LRP12Q9Y561 859 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 PCDHGB5Q9Y5G0 923 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 ITPR2Q14571 2701 aa6.97□□□□□ -1.29
C19orf53-204ENST00000588858 HEATR1Q9H583 2144 aaKnown RBP6.97□□□□□ -1.29
C19orf53-204ENST00000588858 CRYBG3Q68DQ2 2970 aa6.96□□□□□ -1.29
C19orf53-204ENST00000588858 FBN2P35556 2912 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 RAI1Q7Z5J4 1906 aaPredicted RBP6.96□□□□□ -1.3
C19orf53-204ENST00000588858 A0A1B0GWJ7 208 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 A0A1W2PPR1 153 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 LOC390937A0A1W2PQ73 354 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 DAPL1A0PJW8 107 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 DHRS7CA6NNS2 312 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 E7EQL1 145 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 HS3ST1O14792 307 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 XRCC2O43543 280 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 XPNPEP2O43895 674 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 IGLV3-1P01715 115 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 IGHV3-13P01766 116 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 CD1AP06126 327 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 DANCRP0C864 163 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 RAC2P15153 192 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 ATP6V1B1P15313 513 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 KITLGP21583 273 aa6.96□□□□□ -1.3
C19orf53-204ENST00000588858 CFL1P23528 166 aaKnown RBP6.96□□□□□ -1.3
C19orf53-204ENST00000588858 HSD11B1P28845 292 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms