RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 PKD1L2Q7Z442 2459 aa6.4□□□□□ -1.39
SPIDR-228ENST00000588781 A0A1W2PPL8 197 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 DCDC2BA2VCK2 349 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 CPED1A4D0V7 1026 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 RFPL4AA6NLU0 287 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GJE1A6NN92 205 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 RFPL4AL1F8VTS6 287 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 P2RY10O00398 339 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GOSR2O14653 212 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 DNPH1O43598 174 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 DOK2O60496 412 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GPANK1O95872 356 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PDGFAP04085 211 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 CD3DP04234 171 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GSTP1P09211 210 aaKnown RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 TMIGD3P0DMS9 266 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 FGF5P12034 268 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 RPA2P15927 270 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF43P17038 809 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 BCKDHBP21953 392 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 RPS27P42677 84 aaKnown RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 DHPSP49366 369 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 LSM6P62312 80 aaKnown RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 CSNK2A1P68400 391 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GABREP78334 506 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 ZXDAP98168 799 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 SPOCK1Q08629 439 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 MYBPHQ13203 477 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GK2Q14410 553 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PNLIPRP3Q17RR3 467 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 TMEM255AQ5JRV8 349 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PRAMEF17Q5VTA0 474 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 FAM69BQ5VUD6 431 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 IDO2Q6ZQW0 420 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 SLC51BQ86UW2 128 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 TMEM17Q86X19 198 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 BPIFB2Q8N4F0 458 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PLPP7Q8NBV4 271 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 CHST4Q8NCG5 386 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 OR2M3Q8NG83 312 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 KCNG3Q8TAE7 436 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GCDHQ92947 438 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PMEPA1Q969W9 287 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 C10orf35Q96D05 121 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 CDC6Q99741 560 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 SLX1AQ9BQ83 275 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 B3GNT4Q9C0J1 378 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 HEXA-AS1Q9H8Q6 139 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 SLC22A11Q9NSA0 550 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 FAM206AQ9NX38 181 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PIPOXQ9P0Z9 390 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 OPN4Q9UHM6 478 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 GDF2Q9UK05 429 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 ING1Q9UK53 422 aaPredicted RBP6.39□□□□□ -1.39
SPIDR-228ENST00000588781 VDAC3Q9Y277 283 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 PCDHGA5Q9Y5G8 931 aa6.39□□□□□ -1.39
SPIDR-228ENST00000588781 ATRXP46100 2492 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 FXYD6-FXYD2A0A087WZ82 144 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 LOC102723996A0A087X1L8 192 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 IGHV5-10-1A0A0J9YXX1 117 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 hCG_1807616A0A1W2PRN6 198 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 AQP7P3A6NL99 342 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 H0YC42 278 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 I3L521 148 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SULT2B1O00204 365 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 GALR2O43603 387 aaPredicted RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 MTRF1O75570 445 aaKnown RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 TOXO94900 526 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 KDM4BO94953 1096 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 OR2F2O95006 317 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 OR4E1P0C645 316 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ACSM4P0C7M7 580 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 PGA4P0DJD7 388 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 PGA3P0DJD8 388 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 VSIG10L2P0DP72 767 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 RRASP10301 218 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF35P13682 527 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF17P17021 662 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CD34P28906 385 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SSTR2P30874 369 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CALCRP30988 508 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ECI1P42126 302 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ZNF84P51523 738 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 EFNB2P52799 333 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 RPS15P62841 145 aaKnown RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CCL7P80098 99 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 CYCSP99999 105 aaKnown RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SRSF4Q08170 494 aaKnown RBP6.38□□□□□ -1.39
SPIDR-228ENST00000588781 OR2F1Q13607 317 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 PPA1Q15181 289 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ETFDHQ16134 617 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 C1QTNF12Q5T7M4 302 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 TMEM65Q6PI78 240 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SLC25A47Q6Q0C1 308 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 ARSKQ6UWY0 536 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 GSG1LQ6UXU4 331 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 SHISA6Q6ZSJ9 500 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 TMUB2Q71RG4 321 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 KANSL1Q7Z3B3 1105 aa6.38□□□□□ -1.39
SPIDR-228ENST00000588781 TRAPPC6BQ86SZ2 158 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms