RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 CENPOQ9BU64 300 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 REG4Q9BYZ8 158 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 ACTR6Q9GZN1 396 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 NUAK2Q9H093 628 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 SYT4Q9H2B2 425 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 TIGARQ9NQ88 270 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 TXNL4BQ9NX01 149 aaKnown RBP6.86□□□□□ -1.31
VMP1-204ENST00000587259 PAQR5Q9NXK6 330 aaPredicted RBP6.86□□□□□ -1.31
VMP1-204ENST00000587259 KCNG2Q9UJ96 466 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 ADAM30Q9UKF2 790 aa6.86□□□□□ -1.31
VMP1-204ENST00000587259 SF3B6Q9Y3B4 125 aaKnown RBP6.86□□□□□ -1.31
VMP1-204ENST00000587259 SLC22A23A1A5C7 686 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ZNF879B4DU55 563 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 J3QLW9 94 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 PHF1O43189 567 aaPredicted RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 CXCL13O43927 109 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 KHDRBS3O75525 346 aaKnown RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 IGHV4-39P01824 125 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 HLA-DQA2P01906 255 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 CRHP06850 196 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 IMPDH2P12268 514 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 IFNGR1P15260 489 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ZNF823P16415 610 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ZNF19P17023 458 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 IL11P20809 199 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 SHC1P29353 583 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 CD40LGP29965 261 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 NAA10P41227 235 aaPredicted RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 MTNR1BP49286 362 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ENTPD1P49961 510 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 CLRN1P58418 232 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 RPS3AP61247 264 aaKnown RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 RASGEF1BQ0VAM2 473 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 CDK5R1Q15078 307 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 BCL2A1Q16548 175 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 YIF1BQ5BJH7 314 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 BEX5Q5H9J7 111 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 TEX30Q5JUR7 227 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 SPANXN2Q5MJ10 180 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 DDI2Q5TDH0 399 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 DMKNQ6E0U4 476 aaPredicted RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 SLC18B1Q6NT16 456 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 C16orf87Q6PH81 154 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 TPRA1Q86W33 373 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 TIGD4Q8IY51 512 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 OR6V1Q8N148 313 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 NOXO1Q8NFA2 376 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 OR6Q1Q8NGQ2 317 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 OR6N2Q8NGY6 317 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 OR6X1Q8NH79 312 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 OTOSQ8NHW6 89 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ACOT12Q8WYK0 555 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ROBO4Q8WZ75 1007 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 SLC25A46Q96AG3 418 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 S100PBPQ96BU1 408 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ZNF524Q96C55 264 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 SLC25A44Q96H78 314 aaPredicted RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 CEP19Q96LK0 163 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 TBX5Q99593 518 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 TMEM204Q9BSN7 226 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 SF3B5Q9BWJ5 86 aaKnown RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 MROQ9BYG7 248 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 C6orf62Q9GZU0 229 aaPredicted RBP6.85□□□□□ -1.31
VMP1-204ENST00000587259 COMMD4Q9H0A8 199 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 KLHL9Q9P2J3 617 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 GNG8Q9UK08 70 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 B9D1Q9UPM9 204 aa6.85□□□□□ -1.31
VMP1-204ENST00000587259 ALPK2Q86TB3 2170 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 IGLV1-36A0A0B4J1U3 117 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 TRBV2A0A0J9YWF9 115 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ANKRD61A6NGH8 418 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 TMEM212A6NML5 194 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ZNF726A6NNF4 738 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 MS4A18H0YCH9 400 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 GABRPO00591 440 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 TNFSF11O14788 317 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 OGG1O15527 345 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 SELENOFO60613 162 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 SLC16A7O60669 478 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 RAMP1O60894 148 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ZNF254O75437 659 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 AKR7A3O95154 331 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 PLGP00747 810 aaPredicted RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 TFP02787 698 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 PAX1P15863 534 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 PYCR1P32322 319 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 SFTPDP35247 375 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ETV6P41212 452 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 GUCA1AP43080 201 aaPredicted RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 RANBP1P43487 201 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 GDI2P50395 445 aaKnown RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 RAC3P60763 192 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 RPS25P62851 125 aaKnown RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 FABP5Q01469 135 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 MS4A18Q3C1V0 323 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 TMEM176BQ3YBM2 270 aaPredicted RBP6.84□□□□□ -1.31
VMP1-204ENST00000587259 C22orf42Q6IC83 251 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 ADAM5Q6NVV9 412 aa6.84□□□□□ -1.31
VMP1-204ENST00000587259 MZT2AQ6P582 158 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms