RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 C8orf82Q6P1X6 216 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-216ENST00000586813 LEG1Q6P5S2 330 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 PGM2L1Q6PCE3 622 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 DPY19L2P2Q6ZN68 376 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 HIST2H3AQ71DI3 136 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-216ENST00000586813 MOGAT3Q86VF5 341 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 GJC3Q8NFK1 279 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 FAM162AQ96A26 154 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 NEIL1Q96FI4 390 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-216ENST00000586813 PLEKHA8Q96JA3 519 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 TSSK2Q96PF2 358 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 HOPXQ9BPY8 73 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-216ENST00000586813 TMEM246Q9BRR3 403 aa16.19■□□□□ 0.18
TRAF4-216ENST00000586813 SOX21Q9Y651 276 aaPredicted RBP16.19■□□□□ 0.18
TRAF4-216ENST00000586813 TRBV4-1A0A0J9YWV2 114 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 A0A1B0GWJ7 208 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 LRRC30A6NM36 301 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 DCTN6O00399 190 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 FSTL3O95633 263 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 TXNDC12O95881 172 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 COX4I1P13073 169 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 NCK1P16333 377 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 CDKN2AP42771 156 aaKnown RBP16.18■□□□□ 0.18
TRAF4-216ENST00000586813 RPS6KA3P51812 740 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 ZNF404Q494X3 552 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 DNM1P34Q6PK57 102 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 CORO6Q6QEF8 472 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 JAZF1Q86VZ6 243 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 RAB40AQ8WXH6 277 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 WDR76Q9H967 626 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 NDUFAF4Q9P032 175 aa16.18■□□□□ 0.18
TRAF4-216ENST00000586813 IGLV1-36A0A0B4J1U3 117 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 CRABP1P29762 137 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 CENPAP49450 140 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 COX10Q12887 443 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 SEC23BQ15437 767 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 FAM201AQ5SY85 155 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 NLRC3Q7RTR2 1065 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 C1orf87Q8N0U7 546 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 OR8B3Q8NGG8 313 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 TAF15Q92804 592 aaKnown RBP eCLIP16.17■□□□□ 0.18
TRAF4-216ENST00000586813 OR8B2Q96RD0 313 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 KCTD14Q9BQ13 255 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-216ENST00000586813 KRCC1Q9NPI7 259 aaPredicted RBP16.17■□□□□ 0.18
TRAF4-216ENST00000586813 RPS6KA6Q9UK32 745 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 AURKCQ9UQB9 309 aa16.17■□□□□ 0.18
TRAF4-216ENST00000586813 FAM32AQ9Y421 112 aaKnown RBP16.17■□□□□ 0.18
TRAF4-216ENST00000586813 MDFIC2A0A1B0GVS7 189 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 UNC119BA6NIH7 251 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 POM121CA8CG34 1229 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 PPP1R3DO95685 299 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 HLA-DPB1P04440 258 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 SELEP16581 610 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 RHCEP18577 417 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 PMELP40967 661 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 PITPNBP48739 271 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 NUDT2P50583 147 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 PRSS12P56730 875 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 KRTAP27-1Q3LI81 207 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 SMARCD3Q6STE5 483 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 COLCA1Q6ZS62 124 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 HCAR1Q9BXC0 346 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 EFCAB1Q9HAE3 211 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 TMEM100Q9NV29 134 aa16.16■□□□□ 0.18
TRAF4-216ENST00000586813 KIR2DS1A0A191URI9 304 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 NDUFAB1O14561 156 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 IRF2P14316 349 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 FPR3P25089 353 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 GATA4P43694 442 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 RSPO1Q2MKA7 263 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-216ENST00000586813 HACD2Q6Y1H2 254 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 CFAP77Q6ZQR2 320 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 OR6V1Q8N148 313 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 SLC26A10Q8NG04 563 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 FANK1Q8TC84 345 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 C7orf34Q96L11 122 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 DHRS1Q96LJ7 313 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 ERMAPQ96PL5 475 aaPredicted RBP16.15■□□□□ 0.18
TRAF4-216ENST00000586813 NUDT16L1Q9BRJ7 211 aaKnown RBP16.15■□□□□ 0.18
TRAF4-216ENST00000586813 CCDC134Q9H6E4 229 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 ABCD2Q9UBJ2 740 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 CLN8Q9UBY8 286 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 B9D1Q9UPM9 204 aa16.15■□□□□ 0.18
TRAF4-216ENST00000586813 DIRAS1O95057 198 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 ACSM4P0C7M7 580 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 MDKP21741 143 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-216ENST00000586813 DBPQ10586 325 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-216ENST00000586813 MAB21L1Q13394 359 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 GK2Q14410 553 aaPredicted RBP16.14■□□□□ 0.17
TRAF4-216ENST00000586813 SLC18B1Q6NT16 456 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 TREML4Q6UXN2 200 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 DCDC5Q6ZRR9 648 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 SPATC1Q76KD6 591 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 LINC00346Q8IVM7 164 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 FITM2Q8N6M3 262 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 FAM86B1Q8N7N1 296 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 CELF2-AS1Q8N7Q2 184 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 OR10S1Q8NGN2 331 aa16.14■□□□□ 0.17
TRAF4-216ENST00000586813 OR52J3Q8NH60 311 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms