RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 ZNF32P17041 273 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PAX7P23759 505 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PCSK6P29122 969 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 TIMP3P35625 211 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PRKXP51817 358 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 ARF1P84077 181 aaKnown RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 DBPQ10586 325 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 MALLQ13021 153 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 LSAMPQ13449 338 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 DOC2BQ14184 412 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 GSG1Q2KHT4 349 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 TBC1D28Q2M2D7 210 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PHYHD1Q5SRE7 291 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 ZNF684Q5T5D7 378 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 C9orf135Q5VTT2 229 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 TMEM211Q6ICI0 200 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 C16orf87Q6PH81 154 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 DRAM2Q6UX65 266 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 NHLRC1Q6VVB1 395 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 Q6ZT83 130 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 DOK3Q7L591 496 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 WDFY3Q8IZQ1 3526 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 C17orf78Q8N4C9 275 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 FTMTQ8N4E7 242 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PNLDC1Q8NA58 520 aaKnown RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 C1orf162Q8NEQ5 155 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 OR1J2Q8NGS2 313 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 OR1F12Q8NHA8 337 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 MBD3L2Q8NHZ7 208 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 ZNF671Q8TAW3 534 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 AKAP1Q92667 903 aaKnown RBP eCLIP5.44□□□□□ -1.54
LIG3-206ENST00000586058 TMEM106AQ96A25 262 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 SLC25A46Q96AG3 418 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 NABP1Q96AH0 204 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 MAP6Q96JE9 813 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 DCLRE1CQ96SD1 692 aaKnown RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 AMELYQ99218 206 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 KCNS3Q9BQ31 491 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 SFXN3Q9BWM7 321 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PBOV1Q9GZY1 135 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 SLC25A18Q9H1K4 315 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 RGCCQ9H4X1 137 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 OPA3Q9H6K4 179 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 PLGRKTQ9HBL7 147 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 FRRS1LQ9P0K9 344 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 FBXO9Q9UK97 447 aaPredicted RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 SLC5A6Q9Y289 635 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 SF3B6Q9Y3B4 125 aaKnown RBP5.44□□□□□ -1.54
LIG3-206ENST00000586058 UGT2A1Q9Y4X1 527 aa5.44□□□□□ -1.54
LIG3-206ENST00000586058 A0A075B6Q4 140 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 MEGF11A6BM72 1044 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 TRIM64BA6NI03 449 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OR4C45A6NMZ5 311 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FAM25AB3EWG3 89 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FAM25CB3EWG5 89 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FAM25GB3EWG6 89 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 CLDN25C9JDP6 229 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 ERVH48-1M5A8F1 160 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 DVL2O14641 736 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 RAD51DO75771 328 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 UCHL1P09936 223 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 COX5BP10606 129 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FSTP19883 344 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 CCNOP22674 350 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 VAMP1P23763 118 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 IL32P24001 234 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OPRM1P35372 400 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 TGFBR1P36897 503 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 SOX2P48431 317 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 INPP1P49441 399 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 ZNF121P58317 390 aaPredicted RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 NANOS3P60323 173 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 MFGE8Q08431 387 aaPredicted RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 DCTN2Q13561 401 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 ENDOGQ14249 297 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 CNN3Q15417 329 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 MOGQ16653 247 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 CEP78Q5JTW2 689 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 IDNKQ5T6J7 187 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 C1QTNF12Q5T7M4 302 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OTPQ5XKR4 325 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 GLT8D1Q68CQ7 371 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 SFXN4Q6P4A7 337 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 TFAP2EQ6VUC0 442 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 FAM57BQ71RH2 274 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 PGAP1Q75T13 922 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 SSX8Q7RTT4 187 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 NUFIP2Q7Z417 695 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 ADGRE4PQ86SQ3 457 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 SERPINA12Q8IW75 414 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 ELMOD2Q8IZ81 293 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 CISD2Q8N5K1 135 aaKnown RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 ZNF433Q8N7K0 673 aaPredicted RBP5.43□□□□□ -1.54
LIG3-206ENST00000586058 C9orf106Q8NAJ2 232 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OR5L1Q8NGL2 311 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OR5D14Q8NGL3 314 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OR1K1Q8NGR3 316 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 OR13C5Q8NGS8 318 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 RPS4Y2Q8TD47 263 aa5.43□□□□□ -1.54
LIG3-206ENST00000586058 HSD17B8Q92506 261 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms