RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 CX3CR1P49238 355 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 HCCSP53701 268 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 TFF3Q07654 80 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 RAB39AQ14964 217 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 TSC22D1Q15714 1073 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 TIMM50Q3ZCQ8 353 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 TP53I3Q53FA7 332 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 BEX5Q5H9J7 111 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 BCL2L15Q5TBC7 163 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 KCTD8Q6ZWB6 473 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 MS4A15Q8N5U1 240 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 AKR7LQ8NHP1 331 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 FAM222BQ8WU58 562 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 SPRYD4Q8WW59 207 aaPredicted RBP11.25□□□□□ -0.61
TRIM47-202ENST00000585333 HTRA1Q92743 480 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 OR10A2Q9H208 303 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 KLHDC2Q9Y2U9 406 aa11.25□□□□□ -0.61
TRIM47-202ENST00000585333 C5orf49A4QMS7 147 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 MTRF1O75570 445 aaKnown RBP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 SERPINA3P01011 423 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 ANXA2P07355 339 aaKnown RBP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 PATE4P0C8F1 98 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 APEX1P27695 318 aaKnown RBP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 PSMB9P28065 219 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 KIR2DL3P43628 341 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 CDH15P55291 814 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 OR12D2P58182 307 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 TIGD6Q17RP2 521 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 KRTAP27-1Q3LI81 207 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 SYT6Q5T7P8 510 aaPredicted RBP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 TMEM244Q5VVB8 128 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 SSX6Q7RTT6 188 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 WFDC8Q8IUA0 241 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 FTMTQ8N4E7 242 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 OR10S1Q8NGN2 331 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 GATAD2BQ8WXI9 593 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 AKAP1Q92667 903 aaKnown RBP eCLIP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 PELI1Q96FA3 418 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 PGAM5Q96HS1 289 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 POM121L2Q96KW2 1035 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 MGLLQ99685 303 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF649Q9BS31 505 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 ACOXLQ9NUZ1 547 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 NUFIP1Q9UHK0 495 aaKnown RBP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 CLEC2DQ9UHP7 191 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
TRIM47-202ENST00000585333 HIVEP3Q5T1R4 2406 aa11.24□□□□□ -0.61
TRIM47-202ENST00000585333 TENM4Q6N022 2769 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 DIDO1Q9BTC0 2240 aaKnown RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 TRBV2A0A0J9YWF9 115 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 A0A0U1RQV5 110 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 M0R1B8 84 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 RPP14O95059 124 aaKnown RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 LCATP04180 440 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 ACSM4P0C7M7 580 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 CECR9P0C854 216 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 PCMT1P22061 227 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 CCNOP22674 350 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 MAPK3P27361 379 aaPredicted RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 RPL5P46777 297 aaKnown RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF83P51522 516 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 PRKXP51817 358 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF121P58317 390 aaPredicted RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 SELENOVP59797 346 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 TUBA1BP68363 451 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 NAAAQ02083 359 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 DBPQ10586 325 aaPredicted RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 ALKBH1Q13686 389 aaKnown RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 NEDD8Q15843 81 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 TUBA1AQ71U36 451 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 SPATC1Q76KD6 591 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 KLBQ86Z14 1044 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF485Q8NCK3 441 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 CPEB3Q8NE35 698 aaKnown RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 FGFBP3Q8TAT2 258 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 SMIM19Q96E16 107 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 ZNF75AQ96N20 296 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 WFIKKN1Q96NZ8 548 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 AMELYQ99218 206 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 C1QTNF5Q9BXJ0 243 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 OR52A1Q9UKL2 312 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 GTF2A1LQ9UNN4 478 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 GRIP1Q9Y3R0 1128 aa11.23□□□□□ -0.61
TRIM47-202ENST00000585333 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
TRIM47-202ENST00000585333 IGHV1-18A0A0C4DH31 117 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 CCRL2O00421 344 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 OGG1O15527 345 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 PLPP2O43688 288 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 ISG15P05161 165 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 PSKH1P11801 424 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 SELEP16581 610 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 CPEP16870 476 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 GALP22466 123 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 CD40P25942 277 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 TPBGQ13641 420 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 CDK5R1Q15078 307 aa11.22□□□□□ -0.61
TRIM47-202ENST00000585333 MOGQ16653 247 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms