RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ARMC1Q9NVT9 282 aa8.62□□□□□ -1.03
GGA3-219ENST00000584550 DNAJB9Q9UBS3 223 aa8.62□□□□□ -1.03
GGA3-219ENST00000584550 CDH10Q9Y6N8 788 aa8.62□□□□□ -1.03
GGA3-219ENST00000584550 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 TRAPPC2LH3BP13 241 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 CLDN34H7C241 214 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 KHDRBS3O75525 346 aaKnown RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 TXNDC12O95881 172 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 RENP00797 406 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 SCG5P05408 212 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 CCL2P13500 99 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 ZNF32P17041 273 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 GSTM3P21266 225 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 ARHGDIAP52565 204 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 ERVS71-1P61550 626 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 TEKQ02763 1124 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 PLP2Q04941 152 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 ZNF154Q13106 437 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 PCGF3Q3KNV8 242 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 RPL13AP3Q6NVV1 102 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 RASSF6Q6ZTQ3 369 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 ADCK1Q86TW2 530 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 PAPD5Q8NDF8 572 aaKnown RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 ICA1LQ8NDH6 482 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 SDR9C7Q8NEX9 313 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 OR8D4Q8NGM9 314 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 AKR7LQ8NHP1 331 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 FAM110DQ8TAY7 271 aaPredicted RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 SNX33Q8WV41 574 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 UTP4Q969X6 686 aaKnown RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 NABP1Q96AH0 204 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 CITED1Q99966 193 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 DGCR6LQ9BY27 220 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 NUAK2Q9H093 628 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 FN3KQ9H479 309 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 BEX1Q9HBH7 125 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 RPRD1BQ9NQG5 326 aaKnown RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 VSX1Q9NZR4 365 aaPredicted RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 GPR160Q9UJ42 338 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 PURGQ9UJV8 347 aaKnown RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 COA3Q9Y2R0 106 aaPredicted RBP8.61□□□□□ -1.03
GGA3-219ENST00000584550 AP4S1Q9Y587 144 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 MMP24Q9Y5R2 645 aa8.61□□□□□ -1.03
GGA3-219ENST00000584550 IQCMA0A1B0GVH7 501 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 H3BN98 237 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 TIMM23O14925 209 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 ARPC3O15145 178 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 HOXA3O43365 443 aaPredicted RBP8.6□□□□□ -1.03
GGA3-219ENST00000584550 AHCYL1O43865 530 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 FOXH1O75593 365 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 TSPAN15O95858 294 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 SERPINA5P05154 406 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 LCKP06239 509 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 IGHV4-38-2P0DP08 117 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 MSR1P21757 451 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 CCNOP22674 350 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 RAG2P55895 527 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 KLF3P57682 345 aaPredicted RBP8.6□□□□□ -1.03
GGA3-219ENST00000584550 SELENOVP59797 346 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.6□□□□□ -1.03
GGA3-219ENST00000584550 KPNB1Q14974 876 aaKnown RBP8.6□□□□□ -1.03
GGA3-219ENST00000584550 SLC36A3Q495N2 470 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 NRN1LQ496H8 165 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 PABPC1L2AQ5JQF8 200 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 FAM27BQ5VT28 67 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 OLFML2AQ68BL7 652 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 ASPHD2Q6ICH7 369 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 DPPA2Q7Z7J5 298 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 AMIGO2Q86SJ2 522 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 ZNF584Q8IVC4 421 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 GLB1L2Q8IW92 636 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 PAQR4Q8N4S7 273 aaPredicted RBP8.6□□□□□ -1.03
GGA3-219ENST00000584550 IQCF1Q8N6M8 205 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 ATG16L2Q8NAA4 619 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 CYB561A3Q8NBI2 242 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 SLC30A7Q8NEW0 376 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 OR4Q3Q8NH05 313 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 SYNPRQ8TBG9 265 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 TEX47Q8TBZ9 253 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 MRI1Q9BV20 369 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 ZNF556Q9HAH1 456 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 SAP30LQ9HAJ7 183 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 CDH20Q9HBT6 801 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 POLE4Q9NR33 117 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 IL20Q9NYY1 176 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.6□□□□□ -1.03
GGA3-219ENST00000584550 KIF17Q9P2E2 1029 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 POLR1DQ9Y2S0 133 aa8.6□□□□□ -1.03
GGA3-219ENST00000584550 OR6C68A6NDL8 312 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 C12orf71A8MTZ7 269 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 DCTN6O00399 190 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 BHLHE40O14503 412 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 PIN1P1O15428 100 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 SPRY3O43610 288 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 IDH3BO43837 385 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 HLA-DQA2P01906 255 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 CRYBA1P05813 215 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 CST2P09228 141 aa8.59□□□□□ -1.03
GGA3-219ENST00000584550 MMP7P09237 267 aaPredicted RBP8.59□□□□□ -1.03
GGA3-219ENST00000584550 SBK2P0C263 348 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms