RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, human

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-223	ENST00000584472	ST3GAL4	Q11206	333 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SHE	Q5VZ18	495 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	RHOU	Q7L0Q8	258 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SSX6	Q7RTT6	188 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MYPOP	Q86VE0	399 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ACBD7	Q8N6N7	88 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	RNF133	Q8WVZ7	376 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	NEUROG1	Q92886	237 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	TMEM80	Q96HE8	168 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MS4A3	Q96HJ5	214 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	KCNS3	Q9BQ31	491 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	COPS4	Q9BT78	406 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	JAM3	Q9BX67	310 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DUSP21	Q9H596	190 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DDX28	Q9NUL7	540 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	FAIM	Q9NVQ4	179 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CISD1	Q9NZ45	108 aa	Known RBP	13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	POU2F3	Q9UKI9	436 aa		13.82	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ARID1A	O14497	2285 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ACAN	P16112	2415 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	VPS13C	Q709C8	3753 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	IQCM	A0A1B0GVH7	501 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DAPL1	A0PJW8	107 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	PRR32	B1ATL7	298 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ZNF878	C9JN71	531 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ATP6V1G2-DDX39B	F2Z307	99 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	PTH	P01270	115 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	APEX1	P27695	318 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DCK	P27707	260 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	NAAA	Q02083	359 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	KCTD18	Q6PI47	426 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ZNF322	Q6U7Q0	402 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	OR1F12	Q8NHA8	337 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	IPCEF1	Q8WWN9	437 aa	Predicted RBP	13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ASB17	Q8WXJ9	295 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SGCD	Q92629	289 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	OR8B4	Q96RC9	309 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	COQ7	Q99807	217 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ATF6B	Q99941	703 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ZNF649	Q9BS31	505 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	TTTY10	Q9BZA0	68 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	INPP5E	Q9NRR6	644 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CENPM	Q9NSP4	180 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ATPIF1	Q9UII2	106 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	BLOC1S6	Q9UL45	172 aa		13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DIMT1	Q9UNQ2	313 aa	Known RBP	13.81	□□□□□ -0.2
CSNK1D-223	ENST00000584472	RTTN	Q86VV8	2226 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CDK1	P06493	297 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DANCR	P0C864	163 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	STOM	P27105	288 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	HTR5A	P47898	357 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ROM1	Q03395	351 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	EGR3	Q06889	387 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ECH1	Q13011	328 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ZNF544	Q6NX49	715 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DEGS2	Q6QHC5	323 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	PRSS57	Q6UWY2	283 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LRRN1	Q6UXK5	716 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SPATC1	Q76KD6	591 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LHFPL3	Q86UP9	236 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	STX19	Q8N4C7	294 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SLC30A7	Q8NEW0	376 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	TMEM171	Q8WVE6	324 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MYDGF	Q969H8	173 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	POM121L2	Q96KW2	1035 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DHRS9	Q9BPW9	319 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ERVK13-1	Q9NX77	482 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SLCO1C1	Q9NYB5	712 aa		13.8	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LOC100509620	A0A075B734	347 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472		E7EQL1	145 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	PSMD9	O00233	223 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	H2BFM	P0C1H6	154 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LIMS3	P0CW19	117 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	LIMS4	P0CW20	117 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	C21orf33	P30042	268 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	APLNR	P35414	380 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	OPRL1	P41146	370 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	GABARAPL2	P60520	117 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	GALE	Q14376	348 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	KRTAP27-1	Q3LI81	207 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CDON	Q4KMG0	1287 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ZNF684	Q5T5D7	378 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	KRT77	Q7Z794	578 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	DTX2	Q86UW9	622 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ZNF679	Q8IYX0	411 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SLC7A6	Q92536	515 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SIGLEC11	Q96RL6	698 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	KCNJ15	Q99712	375 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ALG8	Q9BVK2	526 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MRO	Q9BYG7	248 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	CXorf56	Q9H5V9	222 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ERVK-18	Q9QC07	812 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	EXOSC1	Q9Y3B2	195 aa	Known RBP	13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	ATP23	Q9Y6H3	246 aa		13.79	□□□□□ -0.2
CSNK1D-223	ENST00000584472	IGHV2OR16-5	A0A0B4J2B6	119 aa		13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	MAGEB4	O15481	346 aa	Predicted RBP	13.78	□□□□□ -0.2
CSNK1D-223	ENST00000584472	SMPD2	O60906	423 aa		13.78	□□□□□ -0.2

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