RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 IL17RELQ6ZVW7 336 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 TMEM179BQ7Z7N9 219 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 ZNRF4Q8WWF5 429 aa17.34■□□□□ 0.37
SS18-224ENST00000584083 RBM4Q9BWF3 364 aaKnown RBP17.34■□□□□ 0.37
SS18-224ENST00000584083 ARRDC5A6NEK1 342 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 B4DSR2 109 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 GYPBP06028 91 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 CD55P08174 381 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 FMO3P31513 532 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 RPS27P42677 84 aaKnown RBP17.33■□□□□ 0.36
SS18-224ENST00000584083 CBX1P83916 185 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 BNIP1Q12981 228 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 RSPO1Q2MKA7 263 aaPredicted RBP17.33■□□□□ 0.36
SS18-224ENST00000584083 CR1LQ2VPA4 569 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 LYPD4Q6UWN0 246 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 OR5AS1Q8N127 324 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 RAB1CQ92928 201 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 C1orf159Q96HA4 380 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 MAP6Q96JE9 813 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 ZNF556Q9HAH1 456 aa17.33■□□□□ 0.36
SS18-224ENST00000584083 TCRBV3S1A0A5B6 114 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 GSC2O15499 205 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 FKBP6O75344 327 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 SPARCP09486 303 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 ACSM4P0C7M7 580 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 ZNF3P17036 446 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 POU1F1P28069 291 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 SLC25A1P53007 311 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 SLC3A1Q07837 685 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 SPRNQ5BIV9 151 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 OR2T2Q6IF00 324 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 FBXW12Q6X9E4 464 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 Q6ZR03 302 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 IQCF1Q8N6M8 205 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 ZNF511Q8NB15 262 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 OR6K6Q8NGW6 343 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 OTULINQ96BN8 352 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 HCAR1Q9BXC0 346 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 CADM1Q9BY67 442 aaKnown RBP17.32■□□□□ 0.36
SS18-224ENST00000584083 WDR76Q9H967 626 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 LPAR2Q9HBW0 351 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 PNRC2Q9NPJ4 139 aaKnown RBP17.32■□□□□ 0.36
SS18-224ENST00000584083 WIPI2Q9Y4P8 454 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 COMMD3-BMI1R4GMX3 469 aa17.32■□□□□ 0.36
SS18-224ENST00000584083 FAM157AC9JC47 383 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 LCATP04180 440 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 CLUP10909 449 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 SPI1P17947 270 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 SRD5A1P18405 259 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 GRK5P34947 590 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 RASSF2P50749 326 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 TPTEP56180 551 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 LMO4P61968 165 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 KRTAP27-1Q3LI81 207 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 PEG10Q86TG7 708 aaKnown RBP17.31■□□□□ 0.36
SS18-224ENST00000584083 NAA40Q86UY6 237 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 HS3ST5Q8IZT8 346 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 ATG16L2Q8NAA4 619 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 SPTSSAQ969W0 71 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 C1QTNF5Q9BXJ0 243 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 NMNAT2Q9BZQ4 307 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 CMC2Q9NRP2 79 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 DNAJB9Q9UBS3 223 aa17.31■□□□□ 0.36
SS18-224ENST00000584083 TMEFF2Q9UIK5 374 aaPredicted RBP17.31■□□□□ 0.36
SS18-224ENST00000584083 SURF4O15260 269 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 TNFRSF1AP19438 455 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 PRKACGP22612 351 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 ENTPD1P49961 510 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 BLVRAP53004 296 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 DVL1P1P54792 670 aaPredicted RBP17.3■□□□□ 0.36
SS18-224ENST00000584083 MALLQ13021 153 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 SLC27A4Q6P1M0 643 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 COLCA1Q6ZS62 124 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 DCXRQ7Z4W1 244 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 GLCCI1Q86VQ1 547 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 PAPD5Q8NDF8 572 aaKnown RBP17.3■□□□□ 0.36
SS18-224ENST00000584083 ZNF582Q96NG8 517 aaPredicted RBP17.3■□□□□ 0.36
SS18-224ENST00000584083 MED20Q9H944 212 aa17.3■□□□□ 0.36
SS18-224ENST00000584083 ISPDA4D126 451 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 FAM183AA6NL82 134 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 M0R135 149 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 ZNF593O00488 134 aaPredicted RBP17.29■□□□□ 0.36
SS18-224ENST00000584083 MSMBP08118 114 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 PCMT1P22061 227 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 SLC6A9P48067 706 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 GINS1Q14691 196 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 TAF13Q15543 124 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 BHLHE23Q8NDY6 225 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 OR8G5Q8NG78 346 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 OR10S1Q8NGN2 331 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 OR13G1Q8NGZ3 307 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 ITLN1Q8WWA0 313 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 SLCO4A1Q96BD0 722 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 RAB39BQ96DA2 213 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 ZNF799Q96GE5 643 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 ZNF665Q9H7R5 613 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 CENPMQ9NSP4 180 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 IL19Q9UHD0 177 aa17.29■□□□□ 0.36
SS18-224ENST00000584083 ATP5HO75947 161 aa17.28■□□□□ 0.36
SS18-224ENST00000584083 PSKH1P11801 424 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms