RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 ERCC1P07992 297 aaPredicted RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 DCAF7P61962 342 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 TMEM244Q5VVB8 128 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 LPCAT3Q6P1A2 487 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 TMEM17Q86X19 198 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 PAQR4Q8N4S7 273 aaPredicted RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 INO80EQ8NBZ0 244 aaPredicted RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 THAP6Q8TBB0 222 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 ST7LQ8TDW4 575 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 ARL5BQ96KC2 179 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 TPSD1Q9BZJ3 242 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 GPR27Q9NS67 375 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 MKL2Q9ULH7 1088 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 C5orf51A6NDU8 294 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 OR2AT4A6NND4 320 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 MS4A18H0YCH9 400 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 PMP2P02689 132 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 BDKRB2P30411 391 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 CASRP41180 1078 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 ARL4DP49703 201 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 POU3F1Q03052 451 aaPredicted RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 UNC119Q13432 240 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 SNTB1Q13884 538 aaKnown RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 ZNF345Q14585 488 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 MS4A18Q3C1V0 323 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 DAZLQ92904 295 aaKnown RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 SPACA5Q96QH8 159 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 PHB2Q99623 299 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.23□□□□□ -0.45
RNF43-205ENST00000581868 SELENOIQ9C0D9 397 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 GAREM1Q9H706 876 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 MBD2Q9UBB5 411 aa12.23□□□□□ -0.45
RNF43-205ENST00000581868 CEP290O15078 2479 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 IGHV3-20A0A0C4DH32 117 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 CPED1A4D0V7 1026 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 NUDT21O43809 227 aaKnown RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 ISG15P05161 165 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 GP1BAP07359 652 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 CD37P11049 281 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 IL32P24001 234 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 PPIAP62937 165 aaKnown RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 ZNF169Q14929 603 aaPredicted RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 LANCL3Q6ZV70 420 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 ESX1Q8N693 406 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 NKAIN3Q8N8D7 197 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 ADAT3Q96EY9 351 aaPredicted RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 EMC6Q9BV81 110 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 FOXQ1Q9C009 403 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 DNTTIP1Q9H147 329 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 ASF1BQ9NVP2 202 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 PRUNE2Q8WUY3 3088 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 LOC390937A0A1W2PQ73 354 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 OR2T1O43869 369 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 FADS1O60427 444 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 IFNA6P05013 189 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 PNLIPRP2P54317 469 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 SRSF4Q08170 494 aaKnown RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 PAN3Q58A45 887 aaKnown RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 RAB12Q6IQ22 244 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 ZNF813Q6ZN06 617 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 GKN2Q86XP6 184 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 OR1S2Q8NGQ3 325 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 OR13C9Q8NGT0 318 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 ZNF416Q9BWM5 594 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 NKX6-2Q9C056 277 aaPredicted RBP12.22□□□□□ -0.45
RNF43-205ENST00000581868 VDAC3Q9Y277 283 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 RHBDD3Q9Y3P4 386 aa12.22□□□□□ -0.45
RNF43-205ENST00000581868 LILRA5A6NI73 299 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 SULT2B1O00204 365 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 SYT7O43581 403 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 WDPCPO95876 746 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 IGHMP01871 453 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 VSIG8P0DPA2 414 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 RAB6AP20340 208 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 SMAD2Q15796 467 aaKnown RBP12.21□□□□□ -0.45
RNF43-205ENST00000581868 RNF144BQ7Z419 303 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 LYPD6Q86Y78 171 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 OR1N1Q8NGS0 311 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 ASB10Q8WXI3 467 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 FOXRED1Q96CU9 486 aaPredicted RBP12.21□□□□□ -0.45
RNF43-205ENST00000581868 C5orf34Q96MH7 638 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 NUDT22Q9BRQ3 303 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 PCDHB16Q9NRJ7 776 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 ZNF107Q9UII5 783 aaPredicted RBP12.21□□□□□ -0.45
RNF43-205ENST00000581868 PCDHB10Q9UN67 800 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 KCNK7Q9Y2U2 307 aa12.21□□□□□ -0.45
RNF43-205ENST00000581868 ARPC4-TTLL3A0A0A6YYG9 625 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 C10orf142B7Z368 130 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 SHISA8B8ZZ34 492 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 FTCDNL1E5RQL4 147 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 FBLP22087 321 aaKnown RBP12.21□□□□□ -0.46
RNF43-205ENST00000581868 INPP5JQ15735 1006 aaPredicted RBP12.21□□□□□ -0.46
RNF43-205ENST00000581868 PHF19Q5T6S3 580 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 DNM1P34Q6PK57 102 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 COX15Q7KZN9 410 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 OR2I1PQ8NGU4 316 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 OR1L3Q8NH93 324 aa12.21□□□□□ -0.46
RNF43-205ENST00000581868 MARCH1Q8TCQ1 289 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms