RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 IDH2P48735 452 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 RPS23P62266 143 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 CYP24A1Q07973 514 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 IHHQ14623 411 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 MAD2L1BPQ15013 274 aaPredicted RBP1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 SOHLH1Q5JUK2 328 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 MBOAT1Q6ZNC8 495 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 LINC00336Q6ZUF6 198 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 MRPL55Q7Z7F7 128 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 SGPP2Q8IWX5 399 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 EIF1ADQ8N9N8 165 aaKnown RBP1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 C11orf72Q8NBR9 251 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 SPATA4Q8NEY3 305 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 HGDQ93099 445 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 EEF1AKMT3Q96AZ1 226 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 TRIM44Q96DX7 344 aaPredicted RBP1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 LZTS2Q9BRK4 669 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 CHCHD7Q9BUK0 85 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 SAMD10Q9BYL1 202 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 STARD10Q9Y365 291 aa1.24□□□□□ -2.21
SMCHD1-206ENST00000581631 KANK1Q14678 1352 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 DENND4AQ7Z401 1863 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 SMIM26A0A096LP01 95 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 A0A0J9YXV3 536 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 OR6C70A6NIJ9 312 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 MFNGO00587 321 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 PLPP1O14494 284 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 PLIN3O60664 434 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 DEDDO75618 318 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 CST1P01037 141 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 ANXA5P08758 320 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 ATF6P18850 670 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 NTF3P20783 257 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 FOXN2P32314 431 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 NAA10P41227 235 aaPredicted RBP1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 PSMD8P48556 350 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 CDH6P55285 790 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 ACTR1AP61163 376 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 MEF2CQ06413 473 aaPredicted RBP1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 SIGLEC14Q08ET2 396 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 BST1Q10588 318 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 MAJINQ3KP22 176 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 ANKDD1AQ495B1 522 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 DEFB134Q4QY38 66 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 KLHL12Q53G59 568 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 UBE2UQ5VVX9 321 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 H3F3CQ6NXT2 135 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 MED27Q6P2C8 311 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 SMARCD3Q6STE5 483 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 ZCCHC7Q8N3Z6 543 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 TEX9Q8N6V9 391 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 GPR26Q8NDV2 337 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 OR1J4Q8NGS1 313 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 KIFAP3Q92845 792 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 CPNE4Q96A23 557 aaPredicted RBP1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 SEC22CQ9BRL7 303 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 MARVELD1Q9BSK0 173 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 TMEM27Q9HBJ8 222 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 HRASLS2Q9NWW9 162 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 PSMC3IPQ9P2W1 217 aaPredicted RBP1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 CSDC2Q9Y534 153 aaKnown RBP1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 ZSWIM8A7E2V4 1837 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 TENM1Q9UKZ4 2725 aa1.23□□□□□ -2.21
SMCHD1-206ENST00000581631 IGHV1-69DA0A0B4J2H0 117 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 FAM240BA0A1B0GVZ2 78 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 ARG1P05089 322 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 ASGR1P07306 291 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 PFN1P07737 140 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 HRES1P13985 223 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 TNNI1P19237 187 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 TALDO1P37837 337 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 MPV17P39210 176 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 STXBP1P61764 594 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 RPL23AP62750 156 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 PPIDQ08752 370 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 DGCR6Q14129 220 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 ZNF266Q14584 549 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 PPM1LQ5SGD2 360 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 PRSS54Q6PEW0 395 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 TBPL2Q6SJ96 375 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 RUFY3Q7L099 469 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 NBPF5PQ86XG9 351 aaPredicted RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 STK40Q8N2I9 435 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 OR4M1Q8NGD0 313 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 OR52E2Q8NGJ4 325 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 PHOSPHO2Q8TCD6 241 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 GPR82Q96P67 336 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 CRACR2AQ9BSW2 395 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 C1orf50Q9BV19 199 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 OR51M1Q9H341 326 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 LINC00574Q9H8X3 128 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 LRRC40Q9H9A6 602 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 CSNK1G1Q9HCP0 422 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 HYPKQ9NX55 129 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 UXTQ9UBK9 157 aaPredicted RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 LGALS13Q9UHV8 139 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 SAMHD1Q9Y3Z3 626 aaKnown RBP1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 TSPOAP1O95153 1857 aa1.22□□□□□ -2.21
SMCHD1-206ENST00000581631 SMCO2A6NFE2 343 aa1.21□□□□□ -2.22
SMCHD1-206ENST00000581631 LYRM9A8MSI8 78 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms