RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CD47Q08722 323 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 SNAPC1Q16533 368 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 TMEM154Q6P9G4 183 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 DPY19L2P2Q6ZN68 376 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 PTCHD4Q6ZW05 846 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 IGFN1Q86VF2 1251 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 CCDC36Q8IYA8 594 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 ENTHD1Q8IYW4 607 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 GPR137CQ8N3F9 429 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 LNX2Q8N448 690 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 KIR3DL3Q8N743 410 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 LRRC75AQ8NAA5 344 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 ADPRHL1Q8NDY3 354 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 TIMD4Q96H15 378 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 PLEKHA8Q96JA3 519 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 ERMAPQ96PL5 475 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-210ENST00000580713 GPX7Q96SL4 187 aaPredicted RBP9.12□□□□□ -0.95
TOP3A-210ENST00000580713 GAL3ST1Q99999 423 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 LINC00470Q9BZP3 86 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 INIPQ9NRY2 104 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 PLEK2Q9NYT0 353 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 TAS2R5Q9NYW4 299 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 WIPI2Q9Y4P8 454 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 ARHGAP32A7KAX9 2087 aa9.12□□□□□ -0.95
TOP3A-210ENST00000580713 IGHV1-69-2A0A0G2JMI3 117 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 ISPDA4D126 451 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 CLDN25C9JDP6 229 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 MS4A18H0YCH9 400 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 M0R129 80 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 SURF4O15260 269 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 IDH3BO43837 385 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 SLC43A1O75387 559 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 VAMP5O95183 116 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 GPANK1O95872 356 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 IFNGP01579 166 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 HLA-HP01893 362 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 F13BP05160 661 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 NOS3P29474 1203 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 CLDN17P56750 224 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 SELENOVP59797 346 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 SNRPGP62308 76 aaKnown RBP9.11□□□□□ -0.95
TOP3A-210ENST00000580713 ERVK-25P63136 954 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 PIGFQ07326 219 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 PUDPQ08623 228 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 CDK5R2Q13319 367 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 SLC9A3R2Q15599 337 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 CEACAM16Q2WEN9 425 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 MS4A18Q3C1V0 323 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 TCEANCQ8N8B7 351 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 OR8J1Q8NGP2 316 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 RHOXF1Q8NHV9 184 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 CNIH3Q8TBE1 160 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 ST7LQ8TDW4 575 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 FBLIM1Q8WUP2 373 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 SNX33Q8WV41 574 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 TRUB1Q8WWH5 349 aaKnown RBP9.11□□□□□ -0.95
TOP3A-210ENST00000580713 RAB1CQ92928 201 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF48Q96MX3 618 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-210ENST00000580713 NR1H4Q96RI1 486 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-210ENST00000580713 IL4I1Q96RQ9 567 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 MS4A7Q9GZW8 240 aaPredicted RBP9.11□□□□□ -0.95
TOP3A-210ENST00000580713 BEX1Q9HBH7 125 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 GPR35Q9HC97 309 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 NRIP3Q9NQ35 241 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 TAAR3PQ9P1P4 343 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 GPR160Q9UJ42 338 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 KLHL21Q9UJP4 597 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 RASD1Q9Y272 281 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 PCDHGB5Q9Y5G0 923 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 IER3IP1Q9Y5U9 82 aa9.11□□□□□ -0.95
TOP3A-210ENST00000580713 A0A1B0GUS0 222 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 A0A1W2PRG6 482 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 RIIAD1A6NNX1 92 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 RPL36A-HNRNPH2H7BZ11 118 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 IMPA2O14732 288 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 ARPC3O15145 178 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 PRKYO43930 277 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 SERPINI2O75830 405 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 CRYBA1P05813 215 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF3P17036 446 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 GABRB1P18505 474 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 CRYBB2P43320 205 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 TOP3AQ13472 1001 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-210ENST00000580713 GSG1Q2KHT4 349 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 C6orf141Q5SZD1 244 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 SLC35F1Q5T1Q4 408 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 GPR139Q6DWJ6 353 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 C16orf87Q6PH81 154 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 KDM8Q8N371 416 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 TMEM163Q8TC26 289 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 WFDC12Q8WWY7 111 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 HDAC2Q92769 488 aaKnown RBP9.1□□□□□ -0.95
TOP3A-210ENST00000580713 ZNF837Q96EG3 531 aaPredicted RBP9.1□□□□□ -0.95
TOP3A-210ENST00000580713 Q96MT0 163 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 TSPAN32Q96QS1 320 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 HINT3Q9NQE9 182 aaKnown RBP9.1□□□□□ -0.95
TOP3A-210ENST00000580713 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.1□□□□□ -0.95
TOP3A-210ENST00000580713 CMC2Q9NRP2 79 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 DECR2Q9NUI1 292 aa9.1□□□□□ -0.95
TOP3A-210ENST00000580713 CLN6Q9NWW5 311 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms