RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 A0A0B4J2E0 115 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 A0A1B0GX12 115 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 BLOC1S5-TXNDC5H3BN57 136 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 TPST1O60507 370 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 RAMP3O60896 148 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 THY1P04216 161 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 CST2P09228 141 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 UMPSP11172 480 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 THBS3P49746 956 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 MVDP53602 400 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 NAA20P61599 178 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 OR1Q1Q15612 314 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 ZNF74Q16587 644 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 LIAT1Q6ZQX7 453 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 LHFPL4Q7Z7J7 247 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 ADAMTS16Q8TE57 1224 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 MAL2Q969L2 176 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 SEPHS2Q99611 448 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 NUF2Q9BZD4 464 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 RAB17Q9H0T7 212 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 C1orf123Q9NWV4 160 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 TCF19Q9Y242 345 aa11.26□□□□□ -0.61
CSNK1D-213ENST00000580446 A6NDX4 124 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 TPST2O60704 377 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 LY86O95711 162 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 MT-ATP6P00846 226 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 DSTNP60981 165 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 GTDC1Q4AE62 458 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 WDR38Q5JTN6 314 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 SLC25A47Q6Q0C1 308 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 SLC30A8Q8IWU4 369 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 DCDC2Q9UHG0 476 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 SMAD5-AS1Q9Y6J3 95 aa11.25□□□□□ -0.61
CSNK1D-213ENST00000580446 SH2D7A6NKC9 451 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 SNRNP70P08621 437 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 FRMD6-AS1P0C7T7 363 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 ZNF133P52736 654 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 UGT2B15P54855 530 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 NCALDP61601 193 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 ECH1Q13011 328 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 TOP3AQ13472 1001 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 PCLAFQ15004 111 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 FAM91A1Q658Y4 838 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 FBXW12Q6X9E4 464 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 NANOGNBQ7Z5D8 188 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 DTX3Q8N9I9 347 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 ZMAT4Q9H898 229 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 ELL3Q9HB65 397 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 ADA2Q9NZK5 511 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 VSX1Q9NZR4 365 aaPredicted RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 CALML5Q9NZT1 146 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 SF3B6Q9Y3B4 125 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-213ENST00000580446 A0A087WUV0 522 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 A0A0G2JPF8 293 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 A0A1W2PRG6 482 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 hCG_1807616A0A1W2PRN6 198 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 NKX6-3A6NJ46 265 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 IQCF6A8MYZ5 107 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 HNRNPCL2B2RXH8 293 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 HNRNPCL3B7ZW38 293 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 F2RL2O00254 374 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 ACOT8O14734 319 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 HNRNPCL1O60812 293 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 GRPP07492 148 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 FGF4P08620 206 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 HNRNPCL4P0DMR1 293 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 COX7A1P24310 79 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 S100A3P33764 101 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 CD200P41217 278 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 PCBD1P61457 104 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 GNG11P61952 73 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 EMX2Q04743 252 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 RPL18Q07020 188 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 GCSAMQ8N6F7 178 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 OR4X2Q8NGF9 303 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 MOSPD2Q8NHP6 518 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 MZB1Q8WU39 189 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 CPPED1Q9BRF8 314 aaPredicted RBP11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 TMEM43Q9BTV4 400 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 TMEM27Q9HBJ8 222 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 SLCO1B3Q9NPD5 702 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 BTNL2Q9UIR0 455 aa11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 PRPF19Q9UMS4 504 aaKnown RBP11.23□□□□□ -0.61
CSNK1D-213ENST00000580446 A0A1W2PQ09 198 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 A6NLC8 198 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 SGCEO43556 437 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 NDUFA2O43678 99 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 CA6P23280 308 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 AQP2P41181 271 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 RGS8P57771 180 aaPredicted RBP11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 ERVFRD-1P60508 538 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 GMFBP60983 142 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 AANATQ16613 207 aa11.22□□□□□ -0.61
CSNK1D-213ENST00000580446 ARMC4Q5T2S8 1044 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms