RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 Q8TCH9 128 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 GNPDA2Q8TDQ7 276 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 DDOQ99489 341 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 HCAR1Q9BXC0 346 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 MUC13Q9H3R2 512 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 POFUT1Q9H488 388 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 TAGLN3Q9UI15 199 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 TMCC3Q9ULS5 477 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 POLR1DQ9Y2S0 133 aa12.2□□□□□ -0.46
SMARCE1-216ENST00000580419 ISPDA4D126 451 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 ARPC2O15144 300 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 OR10H3O60404 316 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 DCTN3O75935 186 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 WNT2P09544 360 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 SBK2P0C263 348 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 ACSM4P0C7M7 580 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 HIST1H1CP16403 213 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 GGT2P36268 569 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 MAGEA2P43356 314 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 CENPAP49450 140 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 MMP16P51512 607 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 SRSF2Q01130 221 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 ZMYND11Q15326 602 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 PCK2Q16822 640 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 C11orf91Q3C1V1 193 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 SPRNQ5BIV9 151 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 LEG1Q6P5S2 330 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 C16orf89Q6UX73 402 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 C12orf54Q6X4T0 127 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 C9orf139Q6ZV77 190 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 OR52J3Q8NH60 311 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 MEGF10Q96KG7 1140 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 NMNAT3Q96T66 252 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 OPA3Q9H6K4 179 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 DDX28Q9NUL7 540 aaKnown RBP12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 ACTR3BQ9P1U1 418 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 MIOXQ9UGB7 285 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 ARL2BPQ9Y2Y0 163 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 INSIG2Q9Y5U4 225 aa12.19□□□□□ -0.46
SMARCE1-216ENST00000580419 DBHP09172 617 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 HOXB6P17509 224 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 ZFP36P26651 326 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 NOS3P29474 1203 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 BLVRAP53004 296 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 LCN2P80188 198 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 SPIBQ01892 262 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 PAX2Q02962 417 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 PAX8Q06710 450 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 MALLQ13021 153 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 ZNF154Q13106 437 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 ESCO2Q56NI9 601 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 TEX30Q5JUR7 227 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 RHOUQ7L0Q8 258 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 KLBQ86Z14 1044 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 BPIFB2Q8N4F0 458 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 OR2AJ1Q8NGZ0 328 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 SLC7A6Q92536 515 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 DACT3Q96B18 629 aaPredicted RBP12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 TSSK2Q96PF2 358 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 CDRT15Q96T59 188 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 ATF6BQ99941 703 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 IFT27Q9BW83 186 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 MAGIXQ9H6Y5 334 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 PNRC2Q9NPJ4 139 aaKnown RBP12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 TMEM100Q9NV29 134 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 UBAP1Q9NZ09 502 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 NUP50Q9UKX7 468 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 BAIAP2Q9UQB8 552 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 CDH10Q9Y6N8 788 aa12.18□□□□□ -0.46
SMARCE1-216ENST00000580419 OR6C68A6NDL8 312 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 CLDN34H7C241 214 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 BHLHE40O14503 412 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 DIRAS1O95057 198 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 RRM2P31350 389 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 CD200P41217 278 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 TPTEP56180 551 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 BPIFB3P59826 476 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 ZNF770Q6IQ21 691 aaPredicted RBP12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 PGBD2Q6P3X8 592 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 LRRN1Q6UXK5 716 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 RASSF6Q6ZTQ3 369 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 DOK3Q7L591 496 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 ZDHHC21Q8IVQ6 265 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 LNX2Q8N448 690 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 OR52L1Q8NGH7 329 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 OR4C15Q8NGM1 316 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 OR2T4Q8NH00 348 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 PLEKHA8Q96JA3 519 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 MRI1Q9BV20 369 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 CDADC1Q9BWV3 514 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 RERGLQ9H628 205 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 TMEM165Q9HC07 324 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 SRA1Q9HD15 236 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 RPRD1BQ9NQG5 326 aaKnown RBP12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 LYVE1Q9Y5Y7 322 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 AUP1Q9Y679 476 aa12.17□□□□□ -0.46
SMARCE1-216ENST00000580419 PKD1L1Q8TDX9 2849 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms