RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 DBPQ10586 325 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 SLC17A1Q14916 467 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 DMKNQ6E0U4 476 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 LYPD4Q6UWN0 246 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 FCRLAQ7L513 359 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 SSX6Q7RTT6 188 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 CEACAM19Q7Z692 300 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 GGNQ86UU5 652 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 CROCCP3Q8IVE0 287 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 GCNT2Q8N0V5 402 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 LRRC75A-AS1Q8N1F1 130 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 SLC26A10Q8NG04 563 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 MBD3L2Q8NHZ7 208 aaPredicted RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 ABHD4Q8TB40 342 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 PHYHIPQ92561 330 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 BORCS5Q969J3 196 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 CEP19Q96LK0 163 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 MRPL13Q9BYD1 178 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 PARPBPQ9NWS1 579 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 GLTPQ9NZD2 209 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 JKAMPQ9P055 326 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 SF3B6Q9Y3B4 125 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 CHD3Q12873 2000 aaKnown RBP8.93□□□□□ -0.98
SS18-210ENST00000578700 CUBNO60494 3623 aa8.93□□□□□ -0.98
SS18-210ENST00000578700 MED12Q93074 2177 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 A0A075B6Q4 140 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ARPC4-TTLL3A0A0A6YYG9 625 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 IGHV3-15A0A0B4J1V0 119 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 RNF212BA8MTL3 300 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ZNF814B7Z6K7 855 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 CLDN25C9JDP6 229 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 E9PI62 339 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 KRT33AO76009 404 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 RPP14O95059 124 aaKnown RBP8.92□□□□□ -0.98
SS18-210ENST00000578700 QDPRP09417 244 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 H2BFMP0C1H6 154 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 TGFBR1P36897 503 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 RPS19P39019 145 aaKnown RBP8.92□□□□□ -0.98
SS18-210ENST00000578700 PSMB10P40306 273 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 MTNR1BP49286 362 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 STARP49675 285 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ROM1Q03395 351 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 MXD1Q05195 221 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 FAM27E3Q08E93 113 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 TAF13Q15543 124 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 MEP1BQ16820 701 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ZNF829Q3KNS6 432 aaPredicted RBP8.92□□□□□ -0.98
SS18-210ENST00000578700 YIF1BQ5BJH7 314 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 LIPNQ5VXI9 398 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 C16orf87Q6PH81 154 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 DEGS2Q6QHC5 323 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 AAED1Q7RTV5 226 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ZNF679Q8IYX0 411 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 GPR137CQ8N3F9 429 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 RFLNBQ8N5W9 214 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ZNF676Q8N7Q3 588 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 OR52N5Q8NH56 324 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 OR5AK2Q8NH90 309 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 MCHR2Q969V1 340 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 SLC25A46Q96AG3 418 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ZC3HAV1LQ96H79 300 aaKnown RBP8.92□□□□□ -0.98
SS18-210ENST00000578700 FOXN4Q96NZ1 517 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 WFIKKN1Q96NZ8 548 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 OR2M2Q96R28 347 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 OR8B4Q96RC9 309 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 UCN2Q96RP3 112 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 SRXN1Q9BYN0 137 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ULBP2Q9BZM5 246 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 SLIRPQ9GZT3 109 aaKnown RBP8.92□□□□□ -0.98
SS18-210ENST00000578700 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 TPK1Q9H3S4 243 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 RNF167Q9H6Y7 350 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 MRM2Q9UI43 246 aaKnown RBP8.92□□□□□ -0.98
SS18-210ENST00000578700 ZNF281Q9Y2X9 895 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
SS18-210ENST00000578700 ANK2Q01484 3957 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ROS1P08922 2347 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 OR6C65A6NJZ3 312 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 TMEM212A6NML5 194 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 PSMD9O00233 223 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 PDCD5O14737 125 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 MAGEB4O15481 346 aaPredicted RBP8.91□□□□□ -0.98
SS18-210ENST00000578700 RGS5O15539 181 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 RAMP1O60894 148 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 CNOT4O95628 575 aaKnown RBP8.91□□□□□ -0.98
SS18-210ENST00000578700 GPANK1O95872 356 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ZNF708P17019 499 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 CALRP27797 417 aaKnown RBP8.91□□□□□ -0.98
SS18-210ENST00000578700 SDC2P34741 201 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 SUCLG1P53597 346 aaKnown RBP8.91□□□□□ -0.98
SS18-210ENST00000578700 ALKBH1Q13686 389 aaKnown RBP8.91□□□□□ -0.98
SS18-210ENST00000578700 DOC2BQ14184 412 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ETFDHQ16134 617 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 HIST3H3Q16695 136 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ACSM3Q53FZ2 586 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 SPANXN2Q5MJ10 180 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ZNF684Q5T5D7 378 aa8.91□□□□□ -0.98
SS18-210ENST00000578700 ABLIM2Q6H8Q1 611 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms