RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 OR2V2Q96R30 315 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 GID8Q9NWU2 228 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 VSX1Q9NZR4 365 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 A4GNTQ9UNA3 340 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 SLC22A2O15244 555 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 NDUFA2O43678 99 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 TROVE2P10155 538 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 CD200P41217 278 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 TTMPQ5BVD1 217 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 BEND6Q5SZJ8 279 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 OLFML2AQ68BL7 652 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 C17orf107Q6ZR85 190 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 CLDN22Q8N7P3 220 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 ZBTB8BQ8NAP8 495 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 DYDC1Q8WWB3 177 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 ATP6V1G3Q96LB4 118 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 ZNF582Q96NG8 517 aaPredicted RBP9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 SLC30A2Q9BRI3 323 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 GRHPRQ9UBQ7 328 aa9.41□□□□□ -0.9
SMARCE1-214ENST00000578112 IMPA2O14732 288 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 TNFRSF13BO14836 293 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 INMTO95050 263 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 KNG1P01042 644 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 CRYBA1P05813 215 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 KDELR2P33947 212 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 ECH1Q13011 328 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 TOP3AQ13472 1001 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 PIN1Q13526 163 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 CYBRD1Q53TN4 286 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 Q6YL49 198 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 MBOAT2Q6ZWT7 520 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 OAFQ86UD1 273 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 GLB1L2Q8IW92 636 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 WFDC12Q8WWY7 111 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 ZNF583Q96ND8 569 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 NUDT16L1Q9BRJ7 211 aaKnown RBP9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 KRCC1Q9NPI7 259 aaPredicted RBP9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 FKBP14Q9NWM8 211 aa9.4□□□□□ -0.9
SMARCE1-214ENST00000578112 PRSS37A4D1T9 235 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 CASQ2O14958 399 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 TXNDC12O95881 172 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 IRF2P14316 349 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 PITPNBP48739 271 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 RAG2P55895 527 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 MZT1Q08AG7 82 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 LAPTM4AQ15012 233 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 KRTAP27-1Q3LI81 207 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 ZBED5Q49AG3 693 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 PLBD1Q6P4A8 553 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 BCL6BQ8N143 479 aaPredicted RBP9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 GJC3Q8NFK1 279 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 CITED1Q99966 193 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 FNDC11Q9BVV2 318 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 ARMCX1Q9P291 453 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 KCNG2Q9UJ96 466 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 STARD10Q9Y365 291 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 CLPSL1A2RUU4 121 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 CLPXO76031 633 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 PTBP3O95758 552 aaKnown RBP9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 IFNW1P05000 195 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 CRABP1P29762 137 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 DEFA6Q01524 100 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 FHL1Q13642 323 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 SLC36A3Q495N2 470 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 GPR157Q5UAW9 335 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 FAM122BQ7Z309 247 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 CYP4Z1Q86W10 505 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 FITM2Q8N6M3 262 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 NKAIN3Q8N8D7 197 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 TBC1D15Q8TC07 691 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 ZDHHC16Q969W1 377 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 ZNF570Q96NI8 536 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 HCAR1Q9BXC0 346 aa9.39□□□□□ -0.91
SMARCE1-214ENST00000578112 ECDO95905 644 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 SDHAP31040 664 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 RAD23AP54725 363 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 SEC61A1P61619 476 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 SPRNQ5BIV9 151 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 CFAP161Q6P656 301 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 COLCA1Q6ZS62 124 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 LDLRAD3Q86YD5 345 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 MICU2Q8IYU8 434 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 ATG16L2Q8NAA4 619 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 DYRK2Q92630 601 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 TMEM246Q9BRR3 403 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 INTS9Q9NV88 658 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 FXYD1O00168 92 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 FBP2O00757 339 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 NDUFB2O95178 105 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 TAGLNQ01995 201 aaKnown RBP9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 C22orf15Q8WYQ4 148 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 C1QTNF5Q9BXJ0 243 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 POFUT1Q9H488 388 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 OPA3Q9H6K4 179 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 NMNAT1Q9HAN9 279 aaPredicted RBP9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 TMEM100Q9NV29 134 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 CLN8Q9UBY8 286 aa9.38□□□□□ -0.91
SMARCE1-214ENST00000578112 TRAV40A0A0B4J280 105 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 ELOVL7A1L3X0 281 aa9.37□□□□□ -0.91
SMARCE1-214ENST00000578112 PIP5K1CO60331 668 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms