RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 A0A075B6Q4 140 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ARPC4-TTLL3A0A0A6YYG9 625 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 IGHV3-15A0A0B4J1V0 119 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 RNF212BA8MTL3 300 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ZNF814B7Z6K7 855 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 CLDN25C9JDP6 229 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 E9PI62 339 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 KRT33AO76009 404 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 RPP14O95059 124 aaKnown RBP8.92□□□□□ -0.98
SS18-207ENST00000577636 QDPRP09417 244 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 H2BFMP0C1H6 154 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 TGFBR1P36897 503 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 RPS19P39019 145 aaKnown RBP8.92□□□□□ -0.98
SS18-207ENST00000577636 PSMB10P40306 273 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 MTNR1BP49286 362 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 STARP49675 285 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ROM1Q03395 351 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 MXD1Q05195 221 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 FAM27E3Q08E93 113 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 TAF13Q15543 124 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 MEP1BQ16820 701 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ZNF829Q3KNS6 432 aaPredicted RBP8.92□□□□□ -0.98
SS18-207ENST00000577636 YIF1BQ5BJH7 314 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 LIPNQ5VXI9 398 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 C16orf87Q6PH81 154 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 DEGS2Q6QHC5 323 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 KLHL24Q6TFL4 600 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 AAED1Q7RTV5 226 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ZNF679Q8IYX0 411 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 GPR137CQ8N3F9 429 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 RFLNBQ8N5W9 214 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ZNF676Q8N7Q3 588 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 OR52N5Q8NH56 324 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 OR5AK2Q8NH90 309 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 MCHR2Q969V1 340 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 SLC25A46Q96AG3 418 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ZC3HAV1LQ96H79 300 aaKnown RBP8.92□□□□□ -0.98
SS18-207ENST00000577636 FOXN4Q96NZ1 517 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 WFIKKN1Q96NZ8 548 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 OR2M2Q96R28 347 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 OR8B4Q96RC9 309 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 UCN2Q96RP3 112 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 SRXN1Q9BYN0 137 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 ULBP2Q9BZM5 246 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 SLIRPQ9GZT3 109 aaKnown RBP8.92□□□□□ -0.98
SS18-207ENST00000577636 SLITRK2Q9H156 845 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 TPK1Q9H3S4 243 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 RNF167Q9H6Y7 350 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 MRM2Q9UI43 246 aaKnown RBP8.92□□□□□ -0.98
SS18-207ENST00000577636 ZNF281Q9Y2X9 895 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 GRIP1Q9Y3R0 1128 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 FREM3P0C091 2139 aa8.92□□□□□ -0.98
SS18-207ENST00000577636 CSPG4Q6UVK1 2322 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 OR6C65A6NJZ3 312 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 TMEM212A6NML5 194 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 PSMD9O00233 223 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 PDCD5O14737 125 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 MAGEB4O15481 346 aaPredicted RBP8.91□□□□□ -0.98
SS18-207ENST00000577636 RGS5O15539 181 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 RAMP1O60894 148 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 CNOT4O95628 575 aaKnown RBP8.91□□□□□ -0.98
SS18-207ENST00000577636 GPANK1O95872 356 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ZNF708P17019 499 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 CALRP27797 417 aaKnown RBP8.91□□□□□ -0.98
SS18-207ENST00000577636 SDC2P34741 201 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 SUCLG1P53597 346 aaKnown RBP8.91□□□□□ -0.98
SS18-207ENST00000577636 ALKBH1Q13686 389 aaKnown RBP8.91□□□□□ -0.98
SS18-207ENST00000577636 DOC2BQ14184 412 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ETFDHQ16134 617 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 HIST3H3Q16695 136 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ACSM3Q53FZ2 586 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 SPANXN2Q5MJ10 180 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ZNF684Q5T5D7 378 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ABLIM2Q6H8Q1 611 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 MZT2AQ6P582 158 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 SLC25A47Q6Q0C1 308 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 PRSS57Q6UWY2 283 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 LRRN1Q6UXK5 716 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 NHLRC1Q6VVB1 395 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 DCXRQ7Z4W1 244 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 OR6Q1Q8NGQ2 317 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 C11orf40Q8WZ69 217 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 TMEM54Q969K7 222 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ADGRG7Q96K78 797 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ABHD6Q9BV23 337 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 SFXN3Q9BWM7 321 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 C1orf198Q9H425 327 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 ELOVL3Q9HB03 270 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 MRPL22Q9NWU5 206 aaKnown RBP8.91□□□□□ -0.98
SS18-207ENST00000577636 SLCO1C1Q9NYB5 712 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 GTF2A1LQ9UNN4 478 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 KLHDC2Q9Y2U9 406 aa8.91□□□□□ -0.98
SS18-207ENST00000577636 IQCMA0A1B0GVH7 501 aa8.9□□□□□ -0.98
SS18-207ENST00000577636 A8MXE2 369 aa8.9□□□□□ -0.98
SS18-207ENST00000577636 H0YC42 278 aa8.9□□□□□ -0.98
SS18-207ENST00000577636 SIAH2O43255 324 aa8.9□□□□□ -0.98
SS18-207ENST00000577636 DHHO43323 396 aa8.9□□□□□ -0.98
SS18-207ENST00000577636 CYTIPO60759 359 aa8.9□□□□□ -0.98
SS18-207ENST00000577636 MRPL33O75394 65 aaKnown RBP8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms