RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 FADS1O60427 444 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 RAMP3O60896 148 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 UPK3AO75631 287 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 SEMG1P04279 462 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 TCRBP04435 133 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 S100A8P05109 93 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ZNF25P17030 456 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 SPI1P17947 270 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 GSTM3P21266 225 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 DPP4P27487 766 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ERP29P30040 261 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 PRDX6P30041 224 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 HTR1FP30939 366 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 CA5AP35218 305 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 UGT1A5P35504 534 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 COILP38432 576 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 VHLP40337 213 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PMELP40967 661 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 SERPINB10P48595 397 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PRKXP51817 358 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PLA2G16P53816 162 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 C21orf59P57076 290 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 RPL23AP62750 156 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 ADARB1P78563 741 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 SLC7A9P82251 487 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 MRPS22P82650 360 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 BCL2L1Q07817 233 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PDIA2Q13087 525 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 DAZ2Q13117 558 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 EIF4EBP1Q13541 118 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 ELAVL3Q14576 367 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 TRAM1Q15629 374 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PSMD5Q16401 504 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 NDUFA9Q16795 377 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 RFX4Q33E94 735 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ZBED5Q49AG3 693 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 C5orf47Q569G3 176 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 DCST2Q5T1A1 773 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 LPCAT3Q6P1A2 487 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ULK3Q6PHR2 472 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 MBOAT1Q6ZNC8 495 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PAQR9Q6ZVX9 377 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 HSD17B13Q7Z5P4 300 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 ZNF100Q8IYN0 542 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 STX19Q8N4C7 294 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PQLC3Q8N755 202 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 SIDT2Q8NBJ9 832 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 PROKR2Q8NFJ6 384 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 OR10W1Q8NGF6 305 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 OR51L1Q8NGJ5 315 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 RHEBL1Q8TAI7 183 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 STOML3Q8TAV4 291 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PSMG2Q969U7 264 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 TMEM45BQ96B21 275 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ZHX1-C8orf76Q96EF9 292 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PAGE5Q96GU1 130 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 QKIQ96PU8 341 aaKnown RBP eCLIP2.57□□□□□ -2
SMCHD1-202ENST00000577300 SLC38A2Q96QD8 506 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 OR5B2Q96R09 309 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 IL4I1Q96RQ9 567 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 UTP23Q9BRU9 249 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 ALG12Q9BV10 488 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 DDA1Q9BW61 102 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 TM6SF2Q9BZW4 377 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 UCK2Q9BZX2 261 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 TMEM38AQ9H6F2 299 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PTGES2Q9H7Z7 377 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 C6orf50Q9HD87 102 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 DAZ3Q9NR90 486 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 PIGVQ9NUD9 493 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ACOXLQ9NUZ1 547 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 MRPL22Q9NWU5 206 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 PTTG3PQ9NZH4 202 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 STOX2Q9P2F5 926 aaPredicted RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 STOML2Q9UJZ1 356 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 DKKL1Q9UK85 242 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 SLC22A13Q9Y226 551 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 RASD1Q9Y272 281 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 MRPS33Q9Y291 106 aaKnown RBP2.57□□□□□ -2
SMCHD1-202ENST00000577300 ALG6Q9Y672 507 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 URGCP-MRPS24S4R325 110 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 ARHGEF10O15013 1369 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 YEATS2Q9ULM3 1422 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 PBRM1Q86U86 1689 aa2.57□□□□□ -2
SMCHD1-202ENST00000577300 C13orf42A0A1B0GVH6 325 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 PRSS37A4D1T9 235 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 GMNCA6NCL1 334 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 VSTM2BA6NLU5 285 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 A8MUI8 341 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 FAM25AB3EWG3 89 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 FAM25CB3EWG5 89 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 FAM25GB3EWG6 89 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 E7EWF7 191 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 G3V2T6 193 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 H3BN98 237 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 PHYHO14832 338 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 FCMRO60667 390 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 SDC3O75056 442 aa2.56□□□□□ -2
SMCHD1-202ENST00000577300 WBP4O75554 376 aaKnown RBP2.56□□□□□ -2
SMCHD1-202ENST00000577300 LYPLA1O75608 230 aaPredicted RBP2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms