RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 IGHV1-46P01743 117 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 IGHV3-13P01766 116 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 IGHV2-5P01817 119 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 TSPAN19P0C672 248 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 IFI30P13284 250 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 PCMT1P22061 227 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 LAP3P28838 519 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 KDELR2P33947 212 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 RBM34P42696 430 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 GDI2P50395 445 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 DAP3P51398 398 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 MMP15P51511 669 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 ZNF133P52736 654 aaPredicted RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 SELENOVP59797 346 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 KRTAP10-2P60368 255 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 LCN2P80188 198 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 MRPS34P82930 218 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 DGCR2P98153 550 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 CD47Q08722 323 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 CYLC2Q14093 348 aaPredicted RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 PCGF3Q3KNV8 242 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 LRRC23Q53EV4 343 aaPredicted RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 ALG10Q5BKT4 473 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 CGB2Q6NT52 195 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 ACSM5Q6NUN0 579 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 ZNF774Q6NX45 483 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 PEG10Q86TG7 708 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 LRRC75AQ8NAA5 344 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 ZBTB34Q8NCN2 500 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 OR1J2Q8NGS2 313 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 OR51A7Q8NH64 312 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 KLF14Q8TD94 323 aaPredicted RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 GEMIN6Q8WXD5 167 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 C22orf15Q8WYQ4 148 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 CCL17Q92583 94 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 DCLRE1CQ96SD1 692 aaKnown RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 NEU1Q99519 415 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 SLC6A7Q99884 636 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 C1orf43Q9BWL3 253 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 PLA2G12AQ9BZM1 189 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 BCL2L14Q9BZR8 327 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 LRMDAQ9H2I8 198 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 TXNIPQ9H3M7 391 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 C1orf198Q9H425 327 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 SAR1AQ9NR31 198 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 DECR2Q9NUI1 292 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 ARGLU1Q9NWB6 273 aaPredicted RBP5.26□□□□□ -1.57
NUP88-212ENST00000576708 SLCO1C1Q9NYB5 712 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 BAG5Q9UL15 447 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 A4GNTQ9UNA3 340 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 MED31Q9Y3C7 131 aa5.26□□□□□ -1.57
NUP88-212ENST00000576708 ISPDA4D126 451 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 CENPBD1B2RD01 187 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 CLDN25C9JDP6 229 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 F2RL2O00254 374 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 IMPA2O14732 288 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 FFAR1O14842 300 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ENTPD5O75356 428 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 B3GALNT1O75752 331 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 PTHP01270 115 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 SBK2P0C263 348 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ZNF26P17031 533 aaPredicted RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 ZFP36P26651 326 aaKnown RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 GCH1P30793 250 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ERFP50548 548 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ARFIP2P53365 341 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 RPL27P61353 136 aaKnown RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 PPP1CBP62140 327 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ACTG1P63261 375 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 FHL1Q13642 323 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ENDOGQ14249 297 aaKnown RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 HFEQ30201 348 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ZNF718Q3SXZ3 478 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 MMEL1Q495T6 779 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 FAM27BQ5VT28 67 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 METTL21CQ5VZV1 264 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 TBPL2Q6SJ96 375 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 VTCN1Q7Z7D3 282 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 DPPA2Q7Z7J5 298 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 NRMQ8IXM6 262 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 DRAXINQ8NBI3 349 aaPredicted RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 OR8J3Q8NGG0 315 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 OR13C2Q8NGS9 318 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ZNF418Q8TF45 676 aaPredicted RBP5.25□□□□□ -1.57
NUP88-212ENST00000576708 RASSF5Q8WWW0 418 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 LIPHQ8WWY8 451 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 SLC7A6Q92536 515 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 RAB1CQ92928 201 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 RCN3Q96D15 328 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 BPIFA2Q96DR5 249 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 RBP7Q96R05 134 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 C1QTNF5Q9BXJ0 243 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 OR2H1Q9GZK4 316 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 KCNN2Q9H2S1 579 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 SAP30LQ9HAJ7 183 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 ESM1Q9NQ30 184 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 MAN2C1Q9NTJ4 1040 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 FGFR1OP2Q9NVK5 253 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 CMTM6Q9NX76 183 aa5.25□□□□□ -1.57
NUP88-212ENST00000576708 UBAP1Q9NZ09 502 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms