RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 TMPRSS13Q9BYE2 586 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 EGLN1Q9GZT9 426 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 OCEL1Q9H607 264 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 CYSLTR2Q9NS75 346 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 ARMC1Q9NVT9 282 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 CDH10Q9Y6N8 788 aa10.03□□□□□ -0.8
LITAF-219ENST00000576334 CCNB2O95067 398 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 VENTXO95231 258 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 PNPP00491 289 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 IGHV2-70P01814 119 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 ACSM4P0C7M7 580 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 THBS2P35442 1172 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 LIPAP38571 399 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 KRTAP27-1Q3LI81 207 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 FAM201AQ5SY85 155 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 LCN8Q6JVE9 175 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 DNM1P34Q6PK57 102 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 FBXW12Q6X9E4 464 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 DHFR2Q86XF0 187 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 C1orf174Q8IYL3 243 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 ATG16L2Q8NAA4 619 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 ZNF511Q8NB15 262 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 SLC37A3Q8NCC5 494 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 TIMD4Q96H15 378 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 COQ7Q99807 217 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 HDHD2Q9H0R4 259 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 MMP26Q9NRE1 261 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 TMEM106BQ9NUM4 274 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 NDE1Q9NXR1 346 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 CYB5R1Q9UHQ9 305 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 NPTNQ9Y639 398 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 TENM1Q9UKZ4 2725 aa10.02□□□□□ -0.81
LITAF-219ENST00000576334 TRAV20A0A0B4J274 112 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 F5H5P2 479 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TCF21O43680 179 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 KRT36O76013 467 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 CYB5R3P00387 301 aaPredicted RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 RAC2P15153 192 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 IFNGR2P38484 337 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 PMELP40967 661 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TRAP1Q12931 704 aaKnown RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 CRMP1Q14194 572 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TRIM25Q14258 630 aaKnown RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 GK2Q14410 553 aaPredicted RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 ZMYND11Q15326 602 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 SNAI3Q3KNW1 292 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 SPATC1Q76KD6 591 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TMEM179BQ7Z7N9 219 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 IQCF1Q8N6M8 205 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 ZNF283Q8N7M2 679 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 C19orf18Q8NEA5 215 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 PROKR2Q8NFJ6 384 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 C22orf15Q8WYQ4 148 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 APOBEC3DQ96AK3 386 aaPredicted RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 RAB39BQ96DA2 213 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 DIRC2Q96SL1 478 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 ATF6BQ99941 703 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 NIPSNAP1Q9BPW8 284 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 CDADC1Q9BWV3 514 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TSSK6Q9BXA6 273 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 HCAR1Q9BXC0 346 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 C1QTNF5Q9BXJ0 243 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TRIM15Q9C019 465 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 MED20Q9H944 212 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 GCM1Q9NP62 436 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TBC1D23Q9NUY8 699 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 TAS2R1Q9NYW7 299 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 IL20Q9NYY1 176 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 CGGBP1Q9UFW8 167 aaPredicted RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 IL19Q9UHD0 177 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 OPN4Q9UHM6 478 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 METRNQ9UJH8 293 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 PPP1R3CQ9UQK1 317 aa10.01□□□□□ -0.81
LITAF-219ENST00000576334 SAMHD1Q9Y3Z3 626 aaKnown RBP10.01□□□□□ -0.81
LITAF-219ENST00000576334 TRAPPC2LH3BP13 241 aa10□□□□□ -0.81
LITAF-219ENST00000576334 ACOT8O14734 319 aa10□□□□□ -0.81
LITAF-219ENST00000576334 IDH3BO43837 385 aa10□□□□□ -0.81
LITAF-219ENST00000576334 LCATP04180 440 aa10□□□□□ -0.81
LITAF-219ENST00000576334 SLC2A1P11166 492 aa10□□□□□ -0.81
LITAF-219ENST00000576334 CALB2P22676 271 aa10□□□□□ -0.81
LITAF-219ENST00000576334 MMP16P51512 607 aa10□□□□□ -0.81
LITAF-219ENST00000576334 MICAQ29983 383 aa10□□□□□ -0.81
LITAF-219ENST00000576334 SPATS1Q496A3 300 aa10□□□□□ -0.81
LITAF-219ENST00000576334 ZMAT1Q5H9K5 638 aa10□□□□□ -0.81
LITAF-219ENST00000576334 DCAF12L2Q5VW00 463 aa10□□□□□ -0.81
LITAF-219ENST00000576334 OR2T5Q6IEZ7 315 aa10□□□□□ -0.81
LITAF-219ENST00000576334 SHQ1Q6PI26 577 aaKnown RBP10□□□□□ -0.81
LITAF-219ENST00000576334 COLCA1Q6ZS62 124 aa10□□□□□ -0.81
LITAF-219ENST00000576334 RASSF6Q6ZTQ3 369 aa10□□□□□ -0.81
LITAF-219ENST00000576334 HS3ST5Q8IZT8 346 aa10□□□□□ -0.81
LITAF-219ENST00000576334 RFLNBQ8N5W9 214 aa10□□□□□ -0.81
LITAF-219ENST00000576334 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10□□□□□ -0.81
LITAF-219ENST00000576334 OR8G5Q8NG78 346 aa10□□□□□ -0.81
LITAF-219ENST00000576334 OR52L1Q8NGH7 329 aa10□□□□□ -0.81
LITAF-219ENST00000576334 OR2AJ1Q8NGZ0 328 aa10□□□□□ -0.81
LITAF-219ENST00000576334 OR2T29Q8NH02 315 aa10□□□□□ -0.81
LITAF-219ENST00000576334 OR2AE1Q8NHA4 323 aa10□□□□□ -0.81
LITAF-219ENST00000576334 DVL3Q92997 716 aaPredicted RBP10□□□□□ -0.81
LITAF-219ENST00000576334 SLCO4A1Q96BD0 722 aa10□□□□□ -0.81
LITAF-219ENST00000576334 MEGF10Q96KG7 1140 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms