RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 IGHV3-23P01764 117 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RETP07949 1114 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 GIPP09681 153 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 CHTF8P0CG12 524 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 SLC35E2BP0CK96 405 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RNF224P0DH78 156 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PGA4P0DJD7 388 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PGA3P0DJD8 388 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PGA5P0DJD9 388 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 LIPCP11150 499 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 NEFHP12036 1026 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RAB3BP20337 219 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PSMB1P20618 241 aaKnown RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 WARSP23381 471 aaKnown RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 TEAD1P28347 426 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 GNRHRP30968 328 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 KDELR2P33947 212 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PFN2P35080 140 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CEACAM3P40198 252 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 MAGEA3P43357 314 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RGS6P49758 472 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 UBE2E1P51965 193 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 DIO3P55073 304 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 FGF8P55075 233 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 MLF1P58340 268 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 MYL6P60660 151 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PRPS1P60891 318 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 STX4Q12846 297 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 DYNC1I2Q13409 638 aaKnown RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 TPBGQ13641 420 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 DGCR6Q14129 220 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 QPRTQ15274 297 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 NSDHLQ15738 373 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 POU2AF1Q16633 256 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 KYAT1Q16773 422 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 LRRC10Q5BKY1 277 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CEP85LQ5SZL2 805 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 THEM4Q5T1C6 240 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 FAM27D1Q5T7N8 215 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 THOC7Q6I9Y2 204 aaKnown RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 FRMPD2BQ6IN97 320 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CGB2Q6NT52 195 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 METTL7BQ6UX53 244 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RFLNAQ6ZTI6 216 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 LINC00173Q6ZV60 143 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 AHSA2Q719I0 299 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 H2AFVQ71UI9 128 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 TMEM179BQ7Z7N9 219 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RALGPS2Q86X27 583 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 ZNF677Q86XU0 584 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RAB43Q86YS6 212 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CDKL3Q8IVW4 592 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 BOD1L2Q8IYS8 172 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 TMEM61Q8N0U2 210 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CA13Q8N1Q1 262 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 NPWQ8N729 165 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 WDSUB1Q8N9V3 476 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 NECAP1Q8NC96 275 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CCDC54Q8NEL0 328 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 OR51G1Q8NGK1 321 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 OR10G9Q8NGN4 311 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 OR2Y1Q8NGV0 311 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 OR10Z1Q8NGY1 313 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 OR10J6PQ8NGY7 276 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 ZFP90Q8TF47 636 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 LRRC29Q8WV35 223 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 GTSF1Q8WW33 167 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 FAM151AQ8WW52 585 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 UCN3Q969E3 161 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 MARC2Q969Z3 335 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RPUSD4Q96CM3 377 aaKnown RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 SGTBQ96EQ0 304 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 UBE2E2Q96LR5 201 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 GABRG3Q99928 467 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 VGLL1Q99990 258 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 OR11A1Q9GZK7 315 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 SLC38A1Q9H2H9 487 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 CLMPQ9H6B4 373 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PLEKHA1Q9HB21 404 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 FBXO8Q9NRD0 319 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 RHBDL2Q9NX52 303 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 SLC25A37Q9NYZ2 338 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 ZNF629Q9UEG4 869 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 ACOT9Q9Y305 439 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 PPIL1Q9Y3C6 166 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 TDRD15B5MCY1 1934 aaKnown RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 CAMTA1Q9Y6Y1 1673 aa1.57□□□□□ -2.16
CHD3-217ENST00000574022 POLR3AO14802 1390 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 BRD4O60885 1362 aaPredicted RBP1.57□□□□□ -2.16
CHD3-217ENST00000574022 BRCA1P38398 1863 aaKnown RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 DENND4AQ7Z401 1863 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 RAI1Q7Z5J4 1906 aaPredicted RBP1.56□□□□□ -2.16
CHD3-217ENST00000574022 A0A0A6YYH2 397 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 IGLV1-36A0A0B4J1U3 117 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 A0A0G2JN53 185 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 FABP12A6NFH5 140 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 A6NJ64 397 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 GOLGA8JA6NMD2 632 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 PRAMEF26H0Y7S4 382 aa1.56□□□□□ -2.16
CHD3-217ENST00000574022 H7C1H1 209 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms