RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 EIF1AYO14602 144 aaKnown RBP13.97□□□□□ -0.17
NUP88-207ENST00000573584 ERCC1P07992 297 aaPredicted RBP13.97□□□□□ -0.17
NUP88-207ENST00000573584 AKR1C4P17516 323 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 RAB3AP20336 220 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 BDKRB2P30411 391 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 HRH1P35367 487 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 DLX2Q07687 328 aaPredicted RBP13.97□□□□□ -0.17
NUP88-207ENST00000573584 INPP5JQ15735 1006 aaPredicted RBP13.97□□□□□ -0.17
NUP88-207ENST00000573584 NSDHLQ15738 373 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 ZNF813Q6ZN06 617 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 MARC2Q969Z3 335 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 CD207Q9UJ71 328 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 SEC16AO15027 2179 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 TLCD2A6NGC4 264 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 OR2AT4A6NND4 320 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 SULT2B1O00204 365 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 KCNAB3O43448 404 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 H2BFMP0C1H6 154 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 EIF1AXP47813 144 aaKnown RBP13.97□□□□□ -0.17
NUP88-207ENST00000573584 EFNA3P52797 238 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 UNC119Q13432 240 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 UNQ6126/PRO20091Q6UXV3 157 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 OR52N4Q8NGI2 321 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 CLEC1BQ9P126 229 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 MBD2Q9UBB5 411 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 PCDHB10Q9UN67 800 aa13.97□□□□□ -0.17
NUP88-207ENST00000573584 TO15178 435 aa13.96□□□□□ -0.17
NUP88-207ENST00000573584 MPZP25189 248 aa13.96□□□□□ -0.17
NUP88-207ENST00000573584 PNLIPRP2P54317 469 aa13.96□□□□□ -0.17
NUP88-207ENST00000573584 ADAD2Q8NCV1 583 aaKnown RBP13.96□□□□□ -0.17
NUP88-207ENST00000573584 DAZLQ92904 295 aaKnown RBP13.96□□□□□ -0.17
NUP88-207ENST00000573584 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.96□□□□□ -0.17
NUP88-207ENST00000573584 FAM117AQ9C073 453 aa13.96□□□□□ -0.17
NUP88-207ENST00000573584 COPS7AQ9UBW8 275 aa13.96□□□□□ -0.17
NUP88-207ENST00000573584 MKL2Q9ULH7 1088 aa13.96□□□□□ -0.17
NUP88-207ENST00000573584 IFNA6P05013 189 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 GNB3P16520 340 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 DNM1P34Q6PK57 102 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 SLC29A4Q7RTT9 530 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 ZNF784Q8NCA9 323 aaPredicted RBP13.96□□□□□ -0.18
NUP88-207ENST00000573584 OR1S2Q8NGQ3 325 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 LMX1AQ8TE12 382 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 PTGES2Q9H7Z7 377 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 PCNX3Q9H6A9 2034 aa13.96□□□□□ -0.18
NUP88-207ENST00000573584 A0A1W2PPC4 97 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 A6NIZ1 184 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 NPIPA5E9PKD4 350 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 MS4A18H0YCH9 400 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 EFSO43281 561 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 RAP1BP61224 184 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 RAP1AP62834 184 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 MS4A18Q3C1V0 323 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 DEGS2Q6QHC5 323 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 NPIPA1Q9UND3 350 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 IGKV1D-43A0A0B4J1Z2 117 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 C13orf42A0A1B0GVH6 325 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 C5orf51A6NDU8 294 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 LILRA5A6NI73 299 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 FTCDNL1E5RQL4 147 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 ZNF208O43345 1280 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 FADS1O60427 444 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 MMP16P51512 607 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 PCK2Q16822 640 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 PABPC1L2AQ5JQF8 200 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 FAHD2BQ6P2I3 314 aaPredicted RBP13.95□□□□□ -0.18
NUP88-207ENST00000573584 FAHD2AQ96GK7 314 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 SELENOIQ9C0D9 397 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 ASF1BQ9NVP2 202 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 SLC39A1Q9NY26 324 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 EYSQ5T1H1 3165 aa13.95□□□□□ -0.18
NUP88-207ENST00000573584 ABCD4O14678 606 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 ATG12O94817 140 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 VSIG8P0DPA2 414 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 EN2P19622 333 aaPredicted RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 HSD11B1P28845 292 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 TDGQ13569 410 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 UQCC3Q6UW78 93 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 WDFY1Q8IWB7 410 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 ASB10Q8WXI3 467 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 NKX2-4Q9H2Z4 354 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 KCNK7Q9Y2U2 307 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 DUS4LO95620 317 aaKnown RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 PSMB6P28072 239 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 AKR1C2P52895 323 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 QRFPP83859 136 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 AKR1C1Q04828 323 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 OR7A5Q15622 319 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 SLC22A24Q8N4F4 322 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 OR1M1Q8NGA1 313 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 OR5AP2Q8NGF4 316 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 OR5T2Q8NGG2 359 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 OR1N1Q8NGS0 311 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 OR10Z1Q8NGY1 313 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 RNF133Q8WVZ7 376 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 ADAT3Q96EY9 351 aaPredicted RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 UCK1Q9HA47 277 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 PURGQ9UJV8 347 aaKnown RBP13.94□□□□□ -0.18
NUP88-207ENST00000573584 SYT7O43581 403 aa13.94□□□□□ -0.18
NUP88-207ENST00000573584 NDUFA2O43678 99 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms