RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 TRAV25A0A0B4J276 109 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SNTNA6NMZ2 147 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 K7EM74 188 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 K7ERQ8 282 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 HAS3O00219 553 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 PSMD11O00231 422 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CCL21O00585 134 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 YKT6O15498 198 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TIMM8AO60220 97 aaPredicted RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 WBP4O75554 376 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 YEATS4O95619 227 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CST1P01037 141 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 IVLP07476 585 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 STAG3L2P0CL84 134 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TROVE2P10155 538 aaKnown RBP eCLIP1.28□□□□□ -2.2
UBR1-209ENST00000569243 ETS2P15036 469 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 MX1P20591 662 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CCT3P49368 545 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 CEBPDP49716 269 aaPredicted RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 ZNF138P52744 262 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CDH6P55285 790 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 C21orf59P57076 290 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 RPL23AP62750 156 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 TPM4P67936 248 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CTAG1AP78358 180 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 MERTKQ12866 999 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 MAB21L1Q13394 359 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 GPR176Q14439 515 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CHRNA6Q15825 494 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 KLHL40Q2TBA0 621 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 XKR7Q5GH72 579 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 THEM4Q5T1C6 240 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ANKRD22Q5VYY1 191 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 PLCXD3Q63HM9 321 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SLC25A25Q6KCM7 469 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TMEM53Q6P2H8 277 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 RNASEKQ6P5S7 137 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 ERICH5Q6P6B1 374 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ARL9Q6T311 187 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SLC25A48Q6ZT89 311 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 NDUFAF7Q7L592 441 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 DHDDSQ86SQ9 333 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 COMTD1Q86VU5 262 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SPATA24Q86W54 205 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ERO1BQ86YB8 467 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SELENOHQ8IZQ5 122 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 SLC7A5P1Q8MH63 180 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 GTPBP8Q8N3Z3 284 aaPredicted RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 COMMD1Q8N668 190 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 OR8U1Q8NH10 309 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CCDC12Q8WUD4 166 aaPredicted RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 CACNG8Q8WXS5 425 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TOP1MTQ969P6 601 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.28□□□□□ -2.2
UBR1-209ENST00000569243 FAM3DQ96BQ1 224 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TVP23CQ96ET8 276 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 PIK3IP1Q96FE7 263 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 C12orf42Q96LP6 360 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 PRRC1Q96M27 445 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ALS2CR12Q96Q35 445 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CHP1Q99653 195 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 RARRES2Q99969 163 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CENPKQ9BS16 269 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ANKRD60Q9BZ19 345 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 UPF3BQ9BZI7 483 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 BLZF1Q9H2G9 400 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 C1orf198Q9H425 327 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 RGCCQ9H4X1 137 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 AZI2Q9H6S1 392 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 RPF2Q9H7B2 306 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 AUNIPQ9H7T9 357 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SGK2Q9HBY8 427 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 TMEM165Q9HC07 324 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ZNF160Q9HCG1 818 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 LZTFL1Q9NQ48 299 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CHRAC1Q9NRG0 131 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 KLHL28Q9NXS3 571 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 SLC2A8Q9NY64 477 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 UVRAGQ9P2Y5 699 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 PITPNC1Q9UKF7 332 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 ADAM28Q9UKQ2 775 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 VANGL2Q9ULK5 521 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 PIGLQ9Y2B2 252 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 MMACHCQ9Y4U1 282 aa1.28□□□□□ -2.2
UBR1-209ENST00000569243 CSDC2Q9Y534 153 aaKnown RBP1.28□□□□□ -2.2
UBR1-209ENST00000569243 MYO3BQ8WXR4 1341 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 FAM240BA0A1B0GVZ2 78 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 A0A1W2PPV4 95 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 ERICH2A1L162 156 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 IQCF5A8MTL0 148 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 ZNF701M0R085 212 aaPredicted RBP1.27□□□□□ -2.21
UBR1-209ENST00000569243 LGALS9O00182 355 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 BCKDKO14874 412 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 NIPSNAP2O75323 286 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 SCELO95171 688 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 FTH1P02794 183 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 S100A6P06703 90 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 TPM3P06753 285 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 CCNB1P14635 433 aa1.27□□□□□ -2.21
UBR1-209ENST00000569243 GSTM3P21266 225 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms