RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 EVX1P49640 407 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ACTC1P68032 377 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ACTA1P68133 377 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 MOGQ16653 247 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 DEFB113Q30KQ7 82 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF718Q3SXZ3 478 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF691Q5VV52 312 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 RFPL4BQ6ZWI9 263 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-208ENST00000567250 SLC35F2Q8IXU6 374 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 LRRC75A-AS1Q8N1F1 130 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 OR10S1Q8NGN2 331 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 SYNPRQ8TBG9 265 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 SNX33Q8WV41 574 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 SLC7A6Q92536 515 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 TRMT61AQ96FX7 289 aaKnown RBP10.48□□□□□ -0.73
SF3B3-208ENST00000567250 MYCBPQ99417 103 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-208ENST00000567250 KCNJ15Q99712 375 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 MROQ9BYG7 248 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 NIPAL2Q9H841 368 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 ADGRL4Q9HBW9 690 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 DYNLRB1Q9NP97 96 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 SLCO1C1Q9NYB5 712 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 CGGBP1Q9UFW8 167 aaPredicted RBP10.48□□□□□ -0.73
SF3B3-208ENST00000567250 PCDHGB1Q9Y5G3 927 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 HSPE1-MOB4S4R3N1 261 aa10.48□□□□□ -0.73
SF3B3-208ENST00000567250 TEX15Q9BXT5 2789 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 H7C417 338 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 M0R233 179 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 DBHP09172 617 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 ACSM4P0C7M7 580 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 PSKH1P11801 424 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 ALOX5APP20292 161 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 PPOXP50336 477 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 MALLQ13021 153 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 KRTAP27-1Q3LI81 207 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 ZMAT1Q5H9K5 638 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 C11orf71Q6IPW1 123 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 DEGS2Q6QHC5 323 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 KRT77Q7Z794 578 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 C8orf59Q8N0T1 100 aaPredicted RBP10.47□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF283Q8N7M2 679 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 IGFBPL1Q8WX77 278 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 DOK1Q99704 481 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 OPA3Q9H6K4 179 aa10.47□□□□□ -0.73
SF3B3-208ENST00000567250 CSMD2Q7Z408 3487 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 AKAP6Q13023 2319 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 SPG11Q96JI7 2443 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 IGLV3-9A0A075B6K5 115 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 PLSCR5A0PG75 271 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 ENTPD6O75354 484 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF254O75437 659 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 LCATP04180 440 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 OR2T7P0C7T2 308 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF250P15622 560 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 PAX1P15863 534 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 GABRB1P18505 474 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 OPRL1P41146 370 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 CX3CR1P49238 355 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 PRKXP51817 358 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 AQP4P55087 323 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 PSMA6P60900 246 aaKnown RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 CXCR4P61073 352 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 ERVS71-1P61550 626 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 ADARB1P78563 741 aaKnown RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 MAD2L1BPQ15013 274 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 NKPD1Q17RQ9 610 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 SWI5Q1ZZU3 235 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 ZNF829Q3KNS6 432 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 SPATA46Q5T0L3 261 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 MBNL2Q5VZF2 373 aaKnown RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 SPATC1Q76KD6 591 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 OR2T27Q8NH04 317 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 RHOXF1Q8NHV9 184 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 SLC25A40Q8TBP6 338 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 KLF14Q8TD94 323 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 NRG4Q8WWG1 115 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 RNFT2Q96EX2 444 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 MRPL48Q96GC5 212 aaKnown RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 FOXC2Q99958 501 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 SYT3Q9BQG1 590 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 C1QTNF5Q9BXJ0 243 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 CACNG6Q9BXT2 260 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 MRPL37Q9BZE1 423 aaKnown RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 GSX2Q9BZM3 304 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 OR2J1Q9GZK6 312 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 MS4A5Q9H3V2 200 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 BARX1Q9HBU1 254 aaPredicted RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 DUSP13Q9UII6 198 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 IKZF2Q9UKS7 526 aa10.46□□□□□ -0.73
SF3B3-208ENST00000567250 RPL36Q9Y3U8 105 aaKnown RBP10.46□□□□□ -0.73
SF3B3-208ENST00000567250 NOTCH2Q04721 2471 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 IRGMA1A4Y4 181 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 OVOL3O00110 214 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 XRCC2O43543 280 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 NGFP01138 241 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 CD8AP01732 235 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 KRT8P05787 483 aa10.45□□□□□ -0.74
SF3B3-208ENST00000567250 ANXA2P07355 339 aaKnown RBP10.45□□□□□ -0.74
SF3B3-208ENST00000567250 DBTP11182 482 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms