RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 FAM71F1Q96KD3 344 aaPredicted RBP12.84□□□□□ -0.35
PALB2-205ENST00000567003 MAGEB18Q96M61 343 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 COG8Q96MW5 612 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 ZNF570Q96NI8 536 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 ECSITQ9BQ95 431 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 WACQ9BTA9 647 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 SYT4Q9H2B2 425 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 GRHPRQ9UBQ7 328 aa12.84□□□□□ -0.35
PALB2-205ENST00000567003 A0A0U1RQK1 487 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 IQCF6A8MYZ5 107 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 ZNF879B4DU55 563 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 XKRYO14609 159 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 SLC16A7O60669 478 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 TOX4O94842 621 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 CD14P08571 375 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 IRF2P14316 349 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 FPR3P25089 353 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 MAB21L1Q13394 359 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 PDCD1Q15116 288 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 MEP1BQ16820 701 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 CLEC12AQ5QGZ9 265 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 SFRP4Q6FHJ7 346 aaPredicted RBP12.83□□□□□ -0.36
PALB2-205ENST00000567003 CORO6Q6QEF8 472 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 FAM122BQ7Z309 247 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 VTCN1Q7Z7D3 282 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 C1orf87Q8N0U7 546 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 SSMEM1Q8WWF3 244 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 GATAD2BQ8WXI9 593 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 LHX4Q969G2 390 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 ZNF583Q96ND8 569 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 RASSF4Q9H2L5 321 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 SMURF1Q9HCE7 757 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 TCF7L1Q9HCS4 588 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 TMEM100Q9NV29 134 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 GMPR2Q9P2T1 348 aaKnown RBP12.83□□□□□ -0.36
PALB2-205ENST00000567003 POLR1DQ9Y2S0 133 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 POMT1Q9Y6A1 747 aa12.83□□□□□ -0.36
PALB2-205ENST00000567003 P2RY10O00398 339 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 FFAR1O14842 300 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 KHDRBS3O75525 346 aaKnown RBP12.82□□□□□ -0.36
PALB2-205ENST00000567003 FCN3O75636 299 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 CLPXO76031 633 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 PSMB10P40306 273 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 RGS6P49758 472 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 BPIFB3P59826 476 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 KRR1Q13601 381 aaKnown RBP12.82□□□□□ -0.36
PALB2-205ENST00000567003 CYLC2Q14093 348 aaPredicted RBP12.82□□□□□ -0.36
PALB2-205ENST00000567003 MPPED2Q15777 294 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 GLB1L2Q8IW92 636 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 OFCC1Q8IZS5 231 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 OR5L1Q8NGL2 311 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 DYDC1Q8WWB3 177 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 DYRK2Q92630 601 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 APOBEC3DQ96AK3 386 aaPredicted RBP12.82□□□□□ -0.36
PALB2-205ENST00000567003 WDFY2Q96P53 400 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 ACOXLQ9NUZ1 547 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 LHFPL6Q9Y693 200 aa12.82□□□□□ -0.36
PALB2-205ENST00000567003 KMT2CQ8NEZ4 4911 aaKnown RBP12.81□□□□□ -0.36
PALB2-205ENST00000567003 A0A087WUU8 490 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 IGHV1-69DA0A0B4J2H0 117 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 FSTL3O95633 263 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 IGHV1-69P01742 117 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 PRB2P02812 416 aaPredicted RBP12.81□□□□□ -0.36
PALB2-205ENST00000567003 KDELR2P33947 212 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 CENPAP49450 140 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 RAD23AP54725 363 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 LSM6P62312 80 aaKnown RBP12.81□□□□□ -0.36
PALB2-205ENST00000567003 PRB3Q04118 309 aaPredicted RBP12.81□□□□□ -0.36
PALB2-205ENST00000567003 RSPO1Q2MKA7 263 aaPredicted RBP12.81□□□□□ -0.36
PALB2-205ENST00000567003 AGBL2Q5U5Z8 902 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 ZNF730Q6ZMV8 503 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 Q6ZSV7 163 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 PTCHD4Q6ZW05 846 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 OR8J3Q8NGG0 315 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 OR11L1Q8NGX0 322 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 TBC1D15Q8TC07 691 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 Q8TCH9 128 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 TSPEARQ8WU66 669 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 TSSK2Q96PF2 358 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 FNDC11Q9BVV2 318 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 KRTAP3-3Q9BYR6 98 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 KRTAP3-2Q9BYR7 98 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 SIRPDQ9H106 197 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 SEMA6AQ9H2E6 1030 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 KIF17Q9P2E2 1029 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 RPS6KA6Q9UK32 745 aa12.81□□□□□ -0.36
PALB2-205ENST00000567003 A0A1B0GWJ7 208 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 ELOVL7A1L3X0 281 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 HTR3EA5X5Y0 456 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 J3QW42 95 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 SOCS2O14508 198 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 ADAM20O43506 726 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 IFNA14P01570 189 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 GATA4P43694 442 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 IER3P46695 156 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 ARF6P62330 175 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 TRAM2Q15035 370 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 ZBED5Q49AG3 693 aa12.8□□□□□ -0.36
PALB2-205ENST00000567003 BEND6Q5SZJ8 279 aaPredicted RBP12.8□□□□□ -0.36
PALB2-205ENST00000567003 ERICH5Q6P6B1 374 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms