RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 AQP10Q96PS8 301 aa14.03□□□□□ -0.16
COMMD4-215ENST00000566843 ZNF251Q9BRH9 671 aa14.03□□□□□ -0.16
COMMD4-215ENST00000566843 SMCO4Q9NRQ5 59 aa14.03□□□□□ -0.16
COMMD4-215ENST00000566843 ATG2AQ2TAZ0 1938 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 FAM221BA6H8Z2 402 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 RNASEK-C17orf49H0YIS7 233 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 UBE2CO00762 179 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 LINC01565O15544 149 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 ZNF264O43296 627 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 OR6A2O95222 327 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 RNH1P13489 461 aaKnown RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 PTAFRP25105 342 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 SNRPEP62304 92 aaKnown RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 QRFPP83859 136 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 INSM1Q01101 510 aaPredicted RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 RUNX3Q13761 415 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 EIF2B1Q14232 305 aaKnown RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 SGCAQ16586 387 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 SLC22A6Q4U2R8 563 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 TMPPEQ6ZT21 453 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 CCDC3Q9BQI4 270 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 NUDT16L1Q9BRJ7 211 aaKnown RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 G6PC2Q9NQR9 355 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 OBP2AQ9NY56 170 aa14.02□□□□□ -0.16
COMMD4-215ENST00000566843 MRPS33Q9Y291 106 aaKnown RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 SPTBN5Q9NRC6 3674 aaKnown RBP14.02□□□□□ -0.16
COMMD4-215ENST00000566843 BLACEA4D250 179 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 MSGN1A6NI15 193 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 FABP1P07148 127 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 RPL27P61353 136 aaKnown RBP14.02□□□□□ -0.17
COMMD4-215ENST00000566843 MED25Q71SY5 747 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 MDGA2Q7Z553 956 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 OR52N5Q8NH56 324 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 CMBLQ96DG6 245 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 MRPL38Q96DV4 380 aaKnown RBP14.02□□□□□ -0.17
COMMD4-215ENST00000566843 FOXN4Q96NZ1 517 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 KLHDC3Q9BQ90 382 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 SEBOXQ9HB31 216 aaPredicted RBP14.02□□□□□ -0.17
COMMD4-215ENST00000566843 PRTFDC1Q9NRG1 225 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 SLC22A11Q9NSA0 550 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 ASH2LQ9UBL3 628 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 WIF1Q9Y5W5 379 aa14.02□□□□□ -0.17
COMMD4-215ENST00000566843 UNC80Q8N2C7 3258 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 LOC107986453A0A1B0GWG9 222 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 MBTPS2O43462 519 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 SLC16A7O60669 478 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 FARS2O95363 451 aaKnown RBP14.01□□□□□ -0.17
COMMD4-215ENST00000566843 CTSBP07858 339 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 SFTA3P0C7M3 94 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 GSK3AP49840 483 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 UNC119Q13432 240 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 RNF212Q495C1 297 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 ZNF585AQ6P3V2 769 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 ZNF600Q6ZNG1 722 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 TMEM200AQ86VY9 491 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 MICU1Q9BPX6 476 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 HRH4Q9H3N8 390 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 RAB18Q9NP72 206 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 ANAPC10Q9UM13 185 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 KIF26BQ2KJY2 2108 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 TRAV36DV7A0A075B6V5 113 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 CEACAM18A8MTB9 384 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 MFNGO00587 321 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 SGCEO43556 437 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 SSX5O60225 188 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 SCGNO76038 276 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 IL33O95760 270 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 APODP05090 189 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 FCARP24071 287 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 BTG2P78543 158 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 CACNA1CQ13936 2221 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 ACKR1Q16570 336 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 TMEM128Q5BJH2 165 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 BTNL8Q6UX41 500 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 FRMD1Q8N878 549 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 MARCH1Q8TCQ1 289 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 METTL21AQ8WXB1 218 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 SLC5A7Q9GZV3 580 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 LAT2Q9GZY6 243 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 DHCR7Q9UBM7 475 aaKnown RBP14.01□□□□□ -0.17
COMMD4-215ENST00000566843 DNAJB11Q9UBS4 358 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 PRODH2Q9UF12 536 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 PCDHGA1Q9Y5H4 931 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 POMT1Q9Y6A1 747 aa14.01□□□□□ -0.17
COMMD4-215ENST00000566843 FAM157AC9JC47 383 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 C11orf98E9PRG8 122 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 SCDO00767 359 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 FBXO24O75426 580 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 SFT2D2O95562 160 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 BPNT1O95861 308 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 IFNA6P05013 189 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 FCGR3AP08637 254 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 HPGDP15428 266 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 CTLA4P16410 223 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 ABCD3P28288 659 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 HSD11B1P28845 292 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 RABIFP47224 123 aa14□□□□□ -0.17
COMMD4-215ENST00000566843 HYAL1Q12794 435 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms