RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SPACA5Q96QH8 159 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 RASL12Q9NYN1 266 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 TNFSF18Q9UNG2 199 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 CPAMD8Q8IZJ3 1885 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 C5orf51A6NDU8 294 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 MS4A18H0YCH9 400 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 NAGAP17050 411 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 BDKRB2P30411 391 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 MS4A18Q3C1V0 323 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 DNM1P34Q6PK57 102 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 INO80EQ8NBZ0 244 aaPredicted RBP12.72□□□□□ -0.37
CDH1-209ENST00000566510 OR10H5Q8NGA6 315 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 ST7LQ8TDW4 575 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 PHB2Q99623 299 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
CDH1-209ENST00000566510 A0A1B0GTI1 187 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 SHISA8B8ZZ34 492 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 LDLRAD4O15165 306 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 SYT7O43581 403 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 SRSF10O75494 262 aaKnown RBP12.71□□□□□ -0.37
CDH1-209ENST00000566510 PMP2P02689 132 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 OPN1LWP04000 364 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 CD38P28907 300 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 CD96P40200 585 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 MC2RQ01718 297 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 TLE3Q04726 772 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 KLHL24Q6TFL4 600 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 LYG2Q86SG7 212 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 NKAIN3Q8N8D7 197 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 ADAD2Q8NCV1 583 aaKnown RBP12.71□□□□□ -0.37
CDH1-209ENST00000566510 OR52H1Q8NGJ2 320 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 OR13C9Q8NGT0 318 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 AIFM2Q9BRQ8 373 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 EDEM2Q9BV94 578 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 SELENOIQ9C0D9 397 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 VN1R1Q9GZP7 353 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 HRH3Q9Y5N1 445 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 RALGAPA1Q6GYQ0 2036 aa12.71□□□□□ -0.37
CDH1-209ENST00000566510 A0A0A6YYH2 397 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 C9orf170A2RU37 121 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 WIPF3A6NGB9 483 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 A6NJ64 397 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 TMEM200CA6NKL6 621 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 OR2AT4A6NND4 320 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 RAB27BO00194 218 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 BCL2L11O43521 198 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 NUDT21O43809 227 aaKnown RBP12.71□□□□□ -0.38
CDH1-209ENST00000566510 FADS1O60427 444 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 OR2F2O95006 317 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 ISG15P05161 165 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 ERCC1P07992 297 aaPredicted RBP12.71□□□□□ -0.38
CDH1-209ENST00000566510 NME1P15531 152 aaKnown RBP12.71□□□□□ -0.38
CDH1-209ENST00000566510 CNR1P21554 472 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 HSD11B2P80365 405 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 OR2F1Q13607 317 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 ZNF260Q3ZCT1 412 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 RAB12Q6IQ22 244 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 LPCAT3Q6P1A2 487 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 RTN4RL2Q86UN3 420 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 SLC25A42Q86VD7 318 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 ZNF101Q8IZC7 436 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 EIF4E3Q8N5X7 224 aaKnown RBP12.71□□□□□ -0.38
CDH1-209ENST00000566510 AQP3Q92482 292 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 SUSD2Q9UGT4 822 aa12.71□□□□□ -0.38
CDH1-209ENST00000566510 FER1L5A0AVI2 2057 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 OR14I1A6ND48 311 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 FOLR1P15328 257 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 ZBTB25P24278 435 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 AKR1C2P52895 323 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 FBXW4P57775 412 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 AKR1C1Q04828 323 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 UNC119Q13432 240 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 C1orf100Q5SVJ3 147 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 AWAT2Q6E213 333 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 ACOT7LQ6ZUV0 252 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 COX15Q7KZN9 410 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 PAQR4Q8N4S7 273 aaPredicted RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 BPIFCQ8NFQ6 507 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 ASB10Q8WXI3 467 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 TMEM234Q8WY98 164 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 FOXRED1Q96CU9 486 aaPredicted RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 ADAT3Q96EY9 351 aaPredicted RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 MESP1Q9BRJ9 268 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 FOXQ1Q9C009 403 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 DUSP15Q9H1R2 295 aaPredicted RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 SEC61A2Q9H9S3 476 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 CPED1A4D0V7 1026 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 RNF222A6NCQ9 220 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 A6NIZ1 184 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 MYF5P13349 255 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 DAP3P51398 398 aaKnown RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 RAP1BP61224 184 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 RAP1AP62834 184 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 ZNF813Q6ZN06 617 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 H1FNTQ75WM6 255 aaPredicted RBP12.7□□□□□ -0.38
CDH1-209ENST00000566510 TMEM17Q86X19 198 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 MBD2Q9UBB5 411 aa12.7□□□□□ -0.38
CDH1-209ENST00000566510 CTSFQ9UBX1 484 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms