RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 HEXAP06865 529 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 DCNP07585 359 aaKnown RBP19.31■□□□□ 0.68
SPSB3-208ENST00000566339 ERCC1P07992 297 aaPredicted RBP19.31■□□□□ 0.68
SPSB3-208ENST00000566339 IL12BP29460 328 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 CTHP32929 405 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 SLC6A9P48067 706 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 TDGQ13569 410 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 CHCHD2P9Q5T1J5 151 aaPredicted RBP19.31■□□□□ 0.68
SPSB3-208ENST00000566339 C1orf140Q5VVS0 124 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 CORO6Q6QEF8 472 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 BAP18Q8IXM2 172 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 SLC22A18ASQ8N1D0 253 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 ZNF248Q8NDW4 579 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 ZNF524Q96C55 264 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 CHMP1AQ9HD42 196 aaPredicted RBP19.31■□□□□ 0.68
SPSB3-208ENST00000566339 LANCL2Q9NS86 450 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 MBD2Q9UBB5 411 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 PISDQ9UG56 409 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 TMED7Q9Y3B3 224 aa19.31■□□□□ 0.68
SPSB3-208ENST00000566339 SPTY2D1-AS1A0A0U1RR47 76 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 PQLC2LA1A4F0 135 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 DCDC2BA2VCK2 349 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 ICOSLGO75144 302 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 CTSEP14091 401 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 DRD1P21728 446 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 PNLIPRP2P54317 469 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 QRFPP83859 136 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 MOGAT2Q3SYC2 334 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 NKAPLQ5M9Q1 402 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 NSUN5P2Q63ZY6 315 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 HOGA1Q86XE5 327 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 SLC26A10Q8NG04 563 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 SAT2Q96F10 170 aaPredicted RBP19.3■□□□□ 0.68
SPSB3-208ENST00000566339 NARS2Q96I59 477 aaKnown RBP19.3■□□□□ 0.68
SPSB3-208ENST00000566339 ADOQ96SZ5 270 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 SEC11CQ9BY50 192 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 SLC5A6Q9Y289 635 aa19.3■□□□□ 0.68
SPSB3-208ENST00000566339 IGKV3D-11A0A0A0MRZ8 115 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 LILRA5A6NI73 299 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 TRIOO75962 3097 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 IFNA6P05013 189 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 GSTP1P09211 210 aaKnown RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 CD1CP29017 333 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 DAP3P51398 398 aaKnown RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 ELAVL1Q15717 326 aaKnown RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 VAX1Q5SQQ9 334 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 HAGHLQ6PII5 290 aaPredicted RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 MISPQ8IVT2 679 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 ARRDC1Q8N5I2 433 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 OR51A2Q8NGJ7 313 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 ST7LQ8TDW4 575 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 ZNF721Q8TF20 911 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 MRGPRFQ96AM1 343 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 MVB12AQ96EY5 273 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 CNTNAP3BQ96NU0 1288 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 RAB18Q9NP72 206 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 CLEC1BQ9P126 229 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 EMC9Q9Y3B6 208 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 SEMA4FO95754 770 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 CAPZBP47756 277 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 FASLGP48023 281 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 SPOCK1Q08629 439 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 ZNF529Q6P280 563 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 PUSL1Q8N0Z8 303 aaKnown RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 OR4D6Q8NGJ1 314 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 SEC22AQ96IW7 307 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 ASF1BQ9NVP2 202 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 MLXQ9UH92 298 aa19.29■□□□□ 0.68
SPSB3-208ENST00000566339 COL5A1P20908 1838 aaPredicted RBP19.29■□□□□ 0.68
SPSB3-208ENST00000566339 OR6C76A6NM76 312 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 H3BSH0 61 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 SRSF5Q13243 272 aaKnown RBP19.28■□□□□ 0.68
SPSB3-208ENST00000566339 EIF3IQ13347 325 aaKnown RBP19.28■□□□□ 0.68
SPSB3-208ENST00000566339 SKA3Q8IX90 412 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 RNF133Q8WVZ7 376 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 PPP1R14AQ96A00 147 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 TBL1XR1Q9BZK7 514 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 TCEAL2Q9H3H9 227 aaPredicted RBP19.28■□□□□ 0.68
SPSB3-208ENST00000566339 MOB1AQ9H8S9 216 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 BIN3Q9NQY0 253 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 DNAJB11Q9UBS4 358 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 CD207Q9UJ71 328 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 COA3Q9Y2R0 106 aaPredicted RBP19.28■□□□□ 0.68
SPSB3-208ENST00000566339 CPAMD8Q8IZJ3 1885 aa19.28■□□□□ 0.68
SPSB3-208ENST00000566339 TMEM269A0A1B0GVZ9 245 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 CCSO14618 274 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 DDAH2O95865 285 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 CBX5P45973 191 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 AIMP2Q13155 320 aaKnown RBP19.27■□□□□ 0.68
SPSB3-208ENST00000566339 TMEM128Q5BJH2 165 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 HLA-DQA1Q5Y7H0 255 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 EIF5AL1Q6IS14 154 aaKnown RBP19.27■□□□□ 0.68
SPSB3-208ENST00000566339 CD163Q86VB7 1156 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 LDLRAD3Q86YD5 345 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 PAQR4Q8N4S7 273 aaPredicted RBP19.27■□□□□ 0.68
SPSB3-208ENST00000566339 ACBD4Q8NC06 268 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 TMEM234Q8WY98 164 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 SLC25A36Q96CQ1 311 aa19.27■□□□□ 0.68
SPSB3-208ENST00000566339 PNO1Q9NRX1 252 aaKnown RBP19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms