RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 NOX3Q9HBY0 568 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 OSGIN2Q9Y236 505 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 MEMO1Q9Y316 297 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 CACNA1BQ00975 2339 aa26.69■■□□□ 1.86
CTCF-203ENST00000566078 A0A1W2PPW3 197 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 F5H5K5 113 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 TMEM91Q6ZNR0 172 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 DPPA2Q7Z7J5 298 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 RGP1Q92546 391 aaPredicted RBP26.68■■□□□ 1.86
CTCF-203ENST00000566078 RTTNQ86VV8 2226 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 GALP22466 123 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 ARR3P36575 388 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 ZNF121P58317 390 aaPredicted RBP26.68■■□□□ 1.86
CTCF-203ENST00000566078 RPS11P62280 158 aaKnown RBP eCLIP26.68■■□□□ 1.86
CTCF-203ENST00000566078 P2RY6Q15077 328 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 YIF1BQ5BJH7 314 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 TMEM211Q6ICI0 200 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 LUZP2Q86TE4 346 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 C1orf162Q8NEQ5 155 aaPredicted RBP26.68■■□□□ 1.86
CTCF-203ENST00000566078 DCUN1D5Q9BTE7 237 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 PIGMQ9H3S5 423 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 MOB1AQ9H8S9 216 aa26.68■■□□□ 1.86
CTCF-203ENST00000566078 TRIM64BA6NI03 449 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 DVL2O14641 736 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 SERPINA3P01011 423 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 DBHP09172 617 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 SLC2A1P11166 492 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 CRYGSP22914 178 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 FGF9P31371 208 aaPredicted RBP26.67■■□□□ 1.86
CTCF-203ENST00000566078 RAB1AP62820 205 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 ZNF474Q6S9Z5 364 aaPredicted RBP26.67■■□□□ 1.86
CTCF-203ENST00000566078 ALDH16A1Q8IZ83 802 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 PBOV1Q9GZY1 135 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 ZNF629Q9UEG4 869 aaPredicted RBP26.67■■□□□ 1.86
CTCF-203ENST00000566078 KALRNO60229 2985 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 POLEQ07864 2286 aa26.67■■□□□ 1.86
CTCF-203ENST00000566078 ATXN7O15265 892 aaPredicted RBP26.66■■□□□ 1.86
CTCF-203ENST00000566078 OTX1P32242 354 aaPredicted RBP26.66■■□□□ 1.86
CTCF-203ENST00000566078 SLC6A9P48067 706 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 GSG1Q2KHT4 349 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 RSPO1Q2MKA7 263 aaPredicted RBP26.66■■□□□ 1.86
CTCF-203ENST00000566078 SFRP5Q5T4F7 317 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 KBTBD8Q8NFY9 601 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 GSTK1Q9Y2Q3 226 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 N6AMT1Q9Y5N5 214 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 MYO7BQ6PIF6 2116 aa26.66■■□□□ 1.86
CTCF-203ENST00000566078 EEF1E1-BLOC1S5C9J1V9 151 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 M0R135 149 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 MSTNO14793 375 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 EEF1E1O43324 174 aaKnown RBP26.65■■□□□ 1.86
CTCF-203ENST00000566078 ANXA2P07355 339 aaKnown RBP26.65■■□□□ 1.86
CTCF-203ENST00000566078 SERPINB10P48595 397 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 UBE2NP61088 152 aaKnown RBP26.65■■□□□ 1.86
CTCF-203ENST00000566078 MRPL49Q13405 166 aaKnown RBP26.65■■□□□ 1.86
CTCF-203ENST00000566078 ACSM3Q53FZ2 586 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 USP43Q70EL4 1123 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 RDH10Q8IZV5 341 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 RND1Q92730 232 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 ZNF799Q96GE5 643 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 DCSTAMPQ9H295 470 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 B3GNT2Q9NY97 397 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 PCNX1Q96RV3 2341 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 SC5DO75845 299 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 APOC1P02654 83 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 PCSK6P29122 969 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 HOXC12P31275 282 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 CEACAM19Q7Z692 300 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 CPEB3Q8NE35 698 aaKnown RBP26.65■■□□□ 1.86
CTCF-203ENST00000566078 OR14A2Q96R54 314 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 NUFIP1Q9UHK0 495 aaKnown RBP26.65■■□□□ 1.86
CTCF-203ENST00000566078 ATPIF1Q9UII2 106 aa26.65■■□□□ 1.86
CTCF-203ENST00000566078 H3BSH0 61 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 KRTAP27-1Q3LI81 207 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 FAM57BQ71RH2 274 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 BHLHA15Q7RTS1 189 aaPredicted RBP26.64■■□□□ 1.85
CTCF-203ENST00000566078 MDP1Q86V88 176 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 CCDC36Q8IYA8 594 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 OR10AC1Q8NH08 325 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 BOD1Q96IK1 185 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 KCTD7Q96MP8 289 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 SLC17A5Q9NRA2 495 aa26.64■■□□□ 1.85
CTCF-203ENST00000566078 A0A1W2PR80 420 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 TTRP02766 147 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 UBCP0CG48 685 aaKnown RBP26.63■■□□□ 1.85
CTCF-203ENST00000566078 APEX1P27695 318 aaKnown RBP26.63■■□□□ 1.85
CTCF-203ENST00000566078 TPTEP56180 551 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 ZNF704Q6ZNC4 412 aaPredicted RBP26.63■■□□□ 1.85
CTCF-203ENST00000566078 MRGPRGQ86SM5 289 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 NAA40Q86UY6 237 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 ELMOD2Q8IZ81 293 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 OR8B12Q8NGG6 310 aa26.63■■□□□ 1.85
CTCF-203ENST00000566078 ARPC4-TTLL3A0A0A6YYG9 625 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 HOXB1P14653 301 aaPredicted RBP26.62■■□□□ 1.85
CTCF-203ENST00000566078 UGT2B10P36537 528 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 PLP2Q04941 152 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 ZMAT1Q5H9K5 638 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 RELL2Q8NC24 303 aaPredicted RBP26.62■■□□□ 1.85
CTCF-203ENST00000566078 OR51A4Q8NGJ6 313 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 PGAM5Q96HS1 289 aa26.62■■□□□ 1.85
CTCF-203ENST00000566078 SLC24A3Q9HC58 644 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms