RNA–Protein interactions for RNA: ENST00000565834.1

COMMD4-213, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-213ENST00000565834 HTR5AP47898 357 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 BCL2L15Q5TBC7 163 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 CCDC36Q8IYA8 594 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 IL17RDQ8NFM7 739 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 TRMT61AQ96FX7 289 aaKnown RBP16.37■□□□□ 0.21
COMMD4-213ENST00000565834 MOB1AQ9H8S9 216 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 G6PC2Q9NQR9 355 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 SLC22A13Q9Y226 551 aa16.37■□□□□ 0.21
COMMD4-213ENST00000565834 KALRNO60229 2985 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 ZNF503-AS2A6NEH8 195 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 EEF1E1-BLOC1S5C9J1V9 151 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 GABRPO00591 440 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 DVL2O14641 736 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 EEF1E1O43324 174 aaKnown RBP16.36■□□□□ 0.21
COMMD4-213ENST00000565834 SERPINA3P01011 423 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 APOC1P02654 83 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 HOXC12P31275 282 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 OTX1P32242 354 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-213ENST00000565834 UBE2NP61088 152 aaKnown RBP16.36■□□□□ 0.21
COMMD4-213ENST00000565834 RAB1AP62820 205 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 TUBA1BP68363 451 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 TSC22D1Q15714 1073 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 YIF1BQ5BJH7 314 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 ZNF474Q6S9Z5 364 aaPredicted RBP16.36■□□□□ 0.21
COMMD4-213ENST00000565834 TUBA1AQ71U36 451 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 LUZP2Q86TE4 346 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 ABHD4Q8TB40 342 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 SLC7A6Q92536 515 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 BOD1Q96IK1 185 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 DCLRE1CQ96SD1 692 aaKnown RBP16.36■□□□□ 0.21
COMMD4-213ENST00000565834 TXNL4BQ9NX01 149 aaKnown RBP16.36■□□□□ 0.21
COMMD4-213ENST00000565834 ATPIF1Q9UII2 106 aa16.36■□□□□ 0.21
COMMD4-213ENST00000565834 M0R135 149 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 HOXB1P14653 301 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-213ENST00000565834 CRYGSP22914 178 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 FGF9P31371 208 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-213ENST00000565834 TGFBR1P36897 503 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 SLC6A9P48067 706 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 ZNF121P58317 390 aaPredicted RBP16.35■□□□□ 0.21
COMMD4-213ENST00000565834 INSL4Q14641 139 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 SPCS2Q15005 226 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 GSG1Q2KHT4 349 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 ODF4Q2M2E3 257 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 SFRP5Q5T4F7 317 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 C22orf42Q6IC83 251 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 MRGPRGQ86SM5 289 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 OR13C5Q8NGS8 318 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 PPP1R14AQ96A00 147 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 ZNF799Q96GE5 643 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 PBOV1Q9GZY1 135 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 RNF167Q9H6Y7 350 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 NOX3Q9HBY0 568 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 B3GNT2Q9NY97 397 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 GSTK1Q9Y2Q3 226 aa16.35■□□□□ 0.21
COMMD4-213ENST00000565834 ANXA2P07355 339 aaKnown RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 DBHP09172 617 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 SLC2A1P11166 492 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 TPTEP56180 551 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 RPS11P62280 158 aaKnown RBP eCLIP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 PLP2Q04941 152 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 MRPL49Q13405 166 aaKnown RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 RSPO1Q2MKA7 263 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 TMEM91Q6ZNR0 172 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 BHLHA15Q7RTS1 189 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 KBTBD8Q8NFY9 601 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 NDNFQ8TB73 568 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 RGP1Q92546 391 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 NUFIP1Q9UHK0 495 aaKnown RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 N6AMT1Q9Y5N5 214 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 ARPC4-TTLL3A0A0A6YYG9 625 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 A0A1W2PPW3 197 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 TRIM64BA6NI03 449 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 A8MXE2 369 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 CCL21O00585 134 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 COX5BP10606 129 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 KRTAP27-1Q3LI81 207 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 ACSM3Q53FZ2 586 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 ZNF704Q6ZNC4 412 aaPredicted RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 USP43Q70EL4 1123 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 MDP1Q86V88 176 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 C17orf78Q8N4C9 275 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 CPEB3Q8NE35 698 aaKnown RBP16.34■□□□□ 0.21
COMMD4-213ENST00000565834 KCTD7Q96MP8 289 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 SLC17A5Q9NRA2 495 aa16.34■□□□□ 0.21
COMMD4-213ENST00000565834 IQCMA0A1B0GVH7 501 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 ACOD1A6NK06 481 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 SC5DO75845 299 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 UBCP0CG48 685 aaKnown RBP16.33■□□□□ 0.2
COMMD4-213ENST00000565834 IL32P24001 234 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 DRAM2Q6UX65 266 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 FAM57BQ71RH2 274 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 CEACAM19Q7Z692 300 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 ELMOD2Q8IZ81 293 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 RDH10Q8IZV5 341 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 DCUN1D5Q9BTE7 237 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 DCSTAMPQ9H295 470 aa16.33■□□□□ 0.2
COMMD4-213ENST00000565834 GATBO75879 557 aaKnown RBP16.32■□□□□ 0.2
COMMD4-213ENST00000565834 TTRP02766 147 aa16.32■□□□□ 0.2
COMMD4-213ENST00000565834 ACSM4P0C7M7 580 aa16.32■□□□□ 0.2
COMMD4-213ENST00000565834 APEX1P27695 318 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms