RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 SLC25A28Q96A46 364 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 SLAMF6Q96DU3 332 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 CCDC120Q96HB5 630 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 LMF1Q96S06 567 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 NAA11Q9BSU3 229 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-249ENST00000564606 IER2Q9BTL4 223 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 PTDSS2Q9BVG9 487 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF471Q9BX82 626 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-249ENST00000564606 SHARPINQ9H0F6 387 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 TCEAL2Q9H3H9 227 aaPredicted RBP6.83□□□□□ -1.32
ATXN3-249ENST00000564606 CA10Q9NS85 328 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 SLC22A11Q9NSA0 550 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 CENPMQ9NSP4 180 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 ANKRD10Q9NXR5 420 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 RASL12Q9NYN1 266 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 KLRF1Q9NZS2 232 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 TNFSF18Q9UNG2 199 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 FARSAQ9Y285 508 aaKnown RBP6.83□□□□□ -1.32
ATXN3-249ENST00000564606 KLHDC2Q9Y2U9 406 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 POMT1Q9Y6A1 747 aa6.83□□□□□ -1.32
ATXN3-249ENST00000564606 IGLV3-12A0A075B6K2 115 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 IGHV1OR21-1A0A087WYE8 117 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 IGLV3-32A0A0A0MS00 114 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 IGHV1OR15-9A0A0B4J2B8 117 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 A0A1W2PR77 199 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 C9orf170A2RU37 121 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 DCDC2BA2VCK2 349 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 C5orf51A6NDU8 294 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 MPTX1A8MV57 137 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 H7C1C5 153 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 DCTN6O00399 190 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 TSPAN4O14817 238 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 LINC01565O15544 149 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 TPD52L2O43399 206 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 DNPH1O43598 174 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 SNAPINO95295 136 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 HPP00738 406 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 PLGP00747 810 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 IFNA21P01568 189 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 HOXD4P09016 255 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 VSIG10L2P0DP72 767 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 CTLA4P16410 223 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF43P17038 809 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 CTRB1P17538 263 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 FPR2P25090 351 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF133P52736 654 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 EMP2P54851 167 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 NXPH1P58417 271 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 PPP1CAP62136 330 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 LSM6P62312 80 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 LCN6P62502 163 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 GABREP78334 506 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 SLC35A1P78382 337 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 POU3F1Q03052 451 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ECH1Q13011 328 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 SQSTM1Q13501 440 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 OR7A5Q15622 319 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 KCNMB1Q16558 191 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF239Q16600 458 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF260Q3ZCT1 412 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 GXYLT1Q4G148 440 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF542PQ5EBM4 170 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ATPAF1Q5TC12 328 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF660Q6AZW8 331 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 CTRB2Q6GPI1 263 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 POMZP3Q6PJE2 187 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ALKAL2Q6UX46 152 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF813Q6ZN06 617 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 MDGA2Q7Z553 956 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 FJX1Q86VR8 437 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 COMMD2Q86X83 199 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF761Q86XN6 746 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 C9orf40Q8IXQ3 194 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 GTPBP8Q8N3Z3 284 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM185AQ8NFB2 350 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 OR4K17Q8NGC6 315 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 OR5H2Q8NGV7 314 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 OR4K15Q8NH41 348 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 OR6X1Q8NH79 312 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 TERB2Q8NHR7 220 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 EMG1Q92979 244 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 RAB3CQ96E17 227 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 SAT2Q96F10 170 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 OXGR1Q96P68 337 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 GPER1Q99527 375 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM59Q9BXS4 323 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 PBOV1Q9GZY1 135 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF768Q9H5H4 540 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 CCDC86Q9H6F5 360 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM185BQ9H7F4 350 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 METTL7AQ9H8H3 244 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 CHMP1AQ9HD42 196 aaPredicted RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 MRPL22Q9NWU5 206 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 C14orf166Q9Y224 244 aaKnown RBP6.82□□□□□ -1.32
ATXN3-249ENST00000564606 WIF1Q9Y5W5 379 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 SCN3AQ9NY46 2000 aa6.82□□□□□ -1.32
ATXN3-249ENST00000564606 LOC105371267A0A1B0GV96 52 aa6.81□□□□□ -1.32
ATXN3-249ENST00000564606 LIPT2A6NK58 231 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms