RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 UBE2AP49459 152 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 FABP6P51161 128 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 RAB11AP62491 216 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CACNG7P62955 275 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CDH17Q12864 832 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 RAB11BQ15907 218 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 RPEL1Q2QD12 228 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PIP5KL1Q5T9C9 394 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PLCXD3Q63HM9 321 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 ARL9Q6T311 187 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 NTM-AS1Q6ZSK4 140 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 LINC00336Q6ZUF6 198 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 MBOAT2Q6ZWT7 520 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 EIF3MQ7L2H7 374 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 FAM122BQ7Z309 247 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 UBALD2Q8IYN6 164 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CMTM1Q8IZ96 169 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PGAM4Q8N0Y7 254 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 BPIFCQ8NFQ6 507 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 OR10W1Q8NGF6 305 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 OR52P1PQ8NH57 321 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 NUBPLQ8TB37 319 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 ITFG1Q8TB96 612 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 ZNF502Q8TBZ5 544 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 SLC7A13Q8TCU3 470 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 C15orf40Q8WUR7 153 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CAPSLQ8WWF8 208 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 TMEM230Q96A57 120 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 NTAN1Q96AB6 310 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 DCPSQ96C86 337 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 BMFQ96LC9 184 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 COL21A1Q96P44 957 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CSPG4P5Q96PW8 444 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 OR5B12Q96R08 314 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 AGMATQ9BSE5 352 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CALN1Q9BXU9 219 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 ULBP2Q9BZM5 246 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 UCK2Q9BZX2 261 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 IQCGQ9H095 443 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 TOLLIPQ9H0E2 274 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 DEFB129Q9H1M3 183 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 CLSTN2Q9H4D0 955 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 TMEM38AQ9H6F2 299 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 SYNDIG1Q9H7V2 258 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 HMG20AQ9NP66 347 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 FAM49BQ9NUQ9 324 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 DDX18Q9NVP1 670 aaKnown RBP1.38□□□□□ -2.19
CHD9-211ENST00000564600 ZNF222Q9UK12 451 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 ST3GAL6Q9Y274 331 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 SYNRGQ9UMZ2 1314 aa1.38□□□□□ -2.19
CHD9-211ENST00000564600 PLA2R1Q13018 1463 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 IGHV1OR15-9A0A0B4J2B8 117 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 GSTTP1A0A1W2PQM5 241 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 ZNF705GA8MUZ8 300 aaPredicted RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 HIDE1A8MVS5 230 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 BCKDKO14874 412 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 EIF3HO15372 352 aaKnown RBP eCLIP1.37□□□□□ -2.19
CHD9-211ENST00000564600 XRCC2O43543 280 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 FCN3O75636 299 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 FLOT1O75955 427 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 SEMA3DO95025 777 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CCNB2O95067 398 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 HLA-DPB1P04440 258 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 ANXA5P08758 320 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 EIF2S2P20042 333 aaKnown RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 TCN2P20062 427 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 NPY1RP25929 384 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CD82P27701 267 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 BMI1P35226 326 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CDKN2BP42772 138 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CSNK1A1P48729 337 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CRISP1P54107 249 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 OR2B8PP59922 312 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 ACTG2P63267 376 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 RGNQ15493 299 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 PPM1LQ5SGD2 360 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 PRR9Q5T870 116 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 TWF2Q6IBS0 349 aaKnown RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 NANOGP8Q6NSW7 305 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 ZNF880Q6PDB4 577 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 WDR86Q86TI4 376 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CHST4Q8NCG5 386 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CCDC54Q8NEL0 328 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 OR52E2Q8NGJ4 325 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 OR52K1Q8NGK4 314 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 OR6Q1Q8NGQ2 317 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 OR52E5Q8NH55 327 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 OR10G6Q8NH81 332 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 AGR3Q8TD06 166 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 RGP1Q92546 391 aaPredicted RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 ESR2Q92731 530 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 TOP1MTQ969P6 601 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 RPEQ96AT9 228 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 DNAJC19Q96DA6 116 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 NRBF2Q96F24 287 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 NARS2Q96I59 477 aaKnown RBP1.37□□□□□ -2.19
CHD9-211ENST00000564600 LINC00477Q96M19 166 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 CAMK2N2Q96S95 79 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 TEAD3Q99594 435 aa1.37□□□□□ -2.19
CHD9-211ENST00000564600 SLC25A2Q9BXI2 301 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms